Chilipp / straditize

⛔️ Python package for digitizing pollen diagrams
https://straditize.readthedocs.io
GNU General Public License v3.0
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Logging failure on Windows: Nonetype object has no attribute write #18

Open Chilipp opened 4 years ago

Chilipp commented 4 years ago

Screenshot

grafik

Files

use the tutorial

Problem description

When starting straditize one windows from the start menu, there seems to be a logging issue with some attribute errors. Not yet sure whether this is really a problem of straditize, or one of the downstream problems. It does not appear when the program is started from the command line.

Environment information

psyplot -aV ``` psy_simple.plugin: version: 1.2.0 psy_strat.plugin: version: 0.1.0 psyplot: requirements: matplotlib: 3.2.1 numpy: 1.18.4 pandas: 1.0.3 python: 3.7.6 | packaged by conda-forge | (default, Mar 23 2020, 22:22:21) [MSC v.1916 64 bit (AMD64)] xarray: 0.15.1 version: 1.2.1 psyplot_gui: requirements: pyqt: 5.12.3 qt: 5.12.5 qtconsole: 4.7.4 version: 1.2.4 ```
straditize -V 0.1.3
conda info -a ``` active environment : straditize active env location : C:\Users\SommerP\Miniconda3\envs\straditize shell level : 2 user config file : C:\Users\SommerP\.condarc populated config files : conda version : 4.8.3 conda-build version : not installed python version : 3.7.6.final.0 virtual packages : base environment : C:\Users\SommerP\Miniconda3 (writable) channel URLs : https://repo.anaconda.com/pkgs/main/win-64 https://repo.anaconda.com/pkgs/main/noarch https://repo.anaconda.com/pkgs/r/win-64 https://repo.anaconda.com/pkgs/r/noarch https://repo.anaconda.com/pkgs/msys2/win-64 https://repo.anaconda.com/pkgs/msys2/noarch package cache : C:\Users\SommerP\Miniconda3\pkgs C:\Users\SommerP\.conda\pkgs C:\Users\SommerP\AppData\Local\conda\conda\pkgs envs directories : C:\Users\SommerP\Miniconda3\envs C:\Users\SommerP\.conda\envs C:\Users\SommerP\AppData\Local\conda\conda\envs platform : win-64 user-agent : conda/4.8.3 requests/2.22.0 CPython/3.7.6 Windows/10 Windows/10.0.18362 administrator : False netrc file : None offline mode : False # conda environments: # base C:\Users\SommerP\Miniconda3 straditize * C:\Users\SommerP\Miniconda3\envs\straditize sys.version: 3.7.6 (default, Jan 8 2020, 20:23:39) [... sys.prefix: C:\Users\SommerP\Miniconda3 sys.executable: C:\Users\SommerP\Miniconda3\python.exe conda location: C:\Users\SommerP\Miniconda3\lib\site-packages\conda conda-build: None conda-env: C:\Users\SommerP\Miniconda3\Scripts\conda-env.exe conda-server: C:\Users\SommerP\Miniconda3\Scripts\conda-server.exe user site dirs: CIO_TEST: CONDA_DEFAULT_ENV: straditize CONDA_EXE: C:\Users\SommerP\Miniconda3\condabin\..\Scripts\conda.exe CONDA_EXES: "C:\Users\SommerP\Miniconda3\condabin\..\Scripts\conda.exe" CONDA_PREFIX: C:\Users\SommerP\Miniconda3\envs\straditize CONDA_PREFIX_1: C:\Users\SommerP\Miniconda3 CONDA_PROMPT_MODIFIER: (straditize) CONDA_PYTHON_EXE: C:\Users\SommerP\Miniconda3\python.exe CONDA_ROOT: C:\Users\SommerP\Miniconda3 CONDA_SHLVL: 2 HOMEPATH: \ PATH: C:\Users\SommerP\Miniconda3;C:\Users\SommerP\Miniconda3\Library\mingw-w64\bin;C:\Users\SommerP\Miniconda3\Library\usr\bin;C:\Users\SommerP\Miniconda3\Library\bin;C:\Users\SommerP\Miniconda3\Scripts;C:\Users\SommerP\Miniconda3\bin;C:\Users\SommerP\Miniconda3\envs\straditize;C:\Users\SommerP\Miniconda3\envs\straditize\Library\mingw-w64\bin;C:\Users\SommerP\Miniconda3\envs\straditize\Library\usr\bin;C:\Users\SommerP\Miniconda3\envs\straditize\Library\bin;C:\Users\SommerP\Miniconda3\envs\straditize\Scripts;C:\Users\SommerP\Miniconda3\envs\straditize\bin;C:\Users\SommerP\Miniconda3\condabin;C:\windows\system32;C:\windows;C:\windows\System32\Wbem;C:\windows\System32\WindowsPowerShell\v1.0;C:\windows\System32\OpenSSH;c:\programme\support\scripts;c:\programme\support\tools;C:\Users\SommerP\AppData\Local\Microsoft\WindowsApps;. PSMODULEPATH: C:\Program Files\WindowsPowerShell\Modules;C:\windows\system32\WindowsPowerShell\v1.0\Modules REQUESTS_CA_BUNDLE: SSL_CERT_FILE: ```
conda list ``` # packages in environment at C:\Users\SommerP\Miniconda3\envs\straditize: # # Name Version Build Channel alabaster 0.7.12 py_0 conda-forge babel 2.8.0 py_0 conda-forge backcall 0.1.0 py_0 conda-forge blas 1.0 mkl brotlipy 0.7.0 py37h4ab8f01_1000 conda-forge bzip2 1.0.8 hfa6e2cd_2 conda-forge ca-certificates 2020.4.5.1 hecc5488_0 conda-forge certifi 2020.4.5.1 py37hc8dfbb8_0 conda-forge cffi 1.14.0 py37ha419a9e_0 conda-forge cftime 1.1.3 py37h44b1f71_0 conda-forge chardet 3.0.4 py37hc8dfbb8_1006 conda-forge cloudpickle 1.4.1 py_0 conda-forge colorama 0.4.3 py_0 conda-forge cryptography 2.9.2 py37h26f1ce3_0 conda-forge curl 7.69.1 h1dcc11c_0 conda-forge cycler 0.10.0 py_2 conda-forge cytoolz 0.10.1 py37hfa6e2cd_0 conda-forge dask-core 2.16.0 py_0 conda-forge decorator 4.4.2 py_0 conda-forge docrep 0.2.7 py_0 conda-forge docutils 0.16 py37hc8dfbb8_1 conda-forge entrypoints 0.3 py37hc8dfbb8_1001 conda-forge et_xmlfile 1.0.1 py_1001 conda-forge fasteners 0.14.1 py_3 conda-forge freetype 2.10.2 hd328e21_0 conda-forge funcargparse 0.2.2 py_0 conda-forge hdf4 4.2.13 hf8e6fe8_1003 conda-forge hdf5 1.10.6 nompi_ha405e13_100 conda-forge icc_rt 2019.0.0 h0cc432a_1 icu 64.2 he025d50_1 conda-forge idna 2.9 py_1 conda-forge imagecodecs 2020.2.18 pypi_0 pypi imagecodecs-lite 2019.12.3 py37h8055547_0 conda-forge imageio 2.8.0 py_0 conda-forge imagesize 1.2.0 py_0 conda-forge intel-openmp 2019.4 245 ipykernel 5.3.0 py37h5ca1d4c_0 conda-forge ipython 7.14.0 py37hc8dfbb8_0 conda-forge ipython_genutils 0.2.0 py_1 conda-forge jdcal 1.4.1 py_0 conda-forge jedi 0.17.0 py37hc8dfbb8_0 conda-forge jinja2 2.11.2 pyh9f0ad1d_0 conda-forge jpeg 9c hfa6e2cd_1001 conda-forge jupyter_client 5.3.4 py37_1 conda-forge jupyter_core 4.6.3 py37hc8dfbb8_1 conda-forge kiwisolver 1.2.0 py37heaa310e_0 conda-forge krb5 1.17.1 hdd46e55_0 conda-forge libblas 3.8.0 14_mkl conda-forge libcblas 3.8.0 14_mkl conda-forge libclang 9.0.1 default_hf44288c_0 conda-forge libcurl 7.69.1 h1dcc11c_0 conda-forge liblapack 3.8.0 14_mkl conda-forge libnetcdf 4.7.4 nompi_h256d12c_104 conda-forge libpng 1.6.37 hfe6a214_1 conda-forge libsodium 1.0.17 h2fa13f4_0 conda-forge libssh2 1.9.0 h3235a2c_2 conda-forge libtiff 4.1.0 h885aae3_6 conda-forge lz4-c 1.9.2 h62dcd97_1 conda-forge markupsafe 1.1.1 py37h8055547_1 conda-forge matplotlib-base 3.2.1 py37h911224e_0 conda-forge mkl 2019.4 245 mkl-service 2.3.0 py37hfa6e2cd_0 conda-forge monotonic 1.5 py_0 conda-forge netcdf4 1.5.3 nompi_py37he83aa3c_105 conda-forge networkx 2.4 py_1 conda-forge numpy 1.18.4 py37hae9e721_0 conda-forge olefile 0.46 py_0 conda-forge openpyxl 3.0.3 py_0 conda-forge openssl 1.1.1g he774522_0 conda-forge packaging 20.4 pyh9f0ad1d_0 conda-forge pandas 1.0.3 py37h3bbf574_1 conda-forge parso 0.7.0 pyh9f0ad1d_0 conda-forge pickleshare 0.7.5 py37hc8dfbb8_1001 conda-forge pillow 7.1.2 py37hc826c6e_0 conda-forge pip 20.1.1 pyh9f0ad1d_0 conda-forge prompt-toolkit 3.0.5 py_0 conda-forge psy-simple 1.2.0 py37_1000 conda-forge psy-strat 0.1.1 py37_0 conda-forge psyplot 1.2.1 py37_1 conda-forge psyplot-gui 1.2.4 py37_0 conda-forge pycparser 2.20 py_0 conda-forge pygments 2.6.1 py_0 conda-forge pyopenssl 19.1.0 py_1 conda-forge pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge pyqt 5.12.3 py37h1834ac0_3 conda-forge pyqt5-sip 4.19.18 pypi_0 pypi pyqtchart 5.12 pypi_0 pypi pyqtwebengine 5.12.1 pypi_0 pypi pysocks 1.7.1 py37hc8dfbb8_1 conda-forge python 3.7.6 h60c2a47_5_cpython conda-forge python-dateutil 2.8.1 py_0 conda-forge python_abi 3.7 1_cp37m conda-forge pytz 2020.1 pyh9f0ad1d_0 conda-forge pywavelets 1.1.1 py37h44b1f71_1 conda-forge pywin32 227 py37hfa6e2cd_0 conda-forge pyyaml 5.3.1 py37h8055547_0 conda-forge pyzmq 19.0.1 py37h453f00a_0 conda-forge qt 5.12.5 h7ef1ec2_0 conda-forge qtconsole 4.7.4 pyh9f0ad1d_0 conda-forge qtpy 1.9.0 py_0 conda-forge requests 2.23.0 pyh8c360ce_2 conda-forge scikit-image 0.17.2 py37h3bbf574_0 conda-forge scipy 1.3.1 py37h29ff71c_0 conda-forge setuptools 46.4.0 py37hc8dfbb8_0 conda-forge six 1.15.0 pyh9f0ad1d_0 conda-forge snowballstemmer 2.0.0 py_0 conda-forge sphinx 3.0.4 py_0 conda-forge sphinx_rtd_theme 0.4.3 py_0 conda-forge sphinxcontrib-applehelp 1.0.2 py_0 conda-forge sphinxcontrib-devhelp 1.0.2 py_0 conda-forge sphinxcontrib-htmlhelp 1.0.3 py_0 conda-forge sphinxcontrib-jsmath 1.0.1 py_0 conda-forge sphinxcontrib-qthelp 1.0.3 py_0 conda-forge sphinxcontrib-serializinghtml 1.1.4 py_0 conda-forge sqlite 3.30.1 hfa6e2cd_0 conda-forge straditize 0.1.3 py37_0 conda-forge tifffile 2020.5.11 py_0 conda-forge tk 8.6.10 hfa6e2cd_0 conda-forge toolz 0.10.0 py_0 conda-forge tornado 6.0.4 py37hfa6e2cd_0 conda-forge traitlets 4.3.3 py37hc8dfbb8_1 conda-forge urllib3 1.25.9 py_0 conda-forge vc 14.1 h869be7e_1 conda-forge vs2015_runtime 14.16.27012 h30e32a0_2 conda-forge wcwidth 0.1.9 pyh9f0ad1d_0 conda-forge wheel 0.34.2 py_1 conda-forge win_inet_pton 1.1.0 py37_0 conda-forge wincertstore 0.2 py37_1003 conda-forge xarray 0.15.1 py_0 conda-forge xz 5.2.5 h2fa13f4_0 conda-forge yaml 0.2.4 he774522_0 conda-forge zeromq 4.3.2 h6538335_2 conda-forge zlib 1.2.11 h2fa13f4_1006 conda-forge zstd 1.4.4 h9f78265_3 conda-forge ```