Could you please state how you formatted the SNP ID's (e.g, rs number, chromosome: base-pair) for the best match across the sumstats, weights, and LD-reference files? Some of the entries for SNP ID in sumstats files can take different forms if they don't have an rs number assigned, and this created an issue in my preliminary analysis. Thank you.
Could you please state how you formatted the SNP ID's (e.g, rs number, chromosome: base-pair) for the best match across the sumstats, weights, and LD-reference files? Some of the entries for SNP ID in sumstats files can take different forms if they don't have an rs number assigned, and this created an issue in my preliminary analysis. Thank you.