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Christensen-Lab-Dartmouth / methyLiftover

A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set
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input file format #2

Open zsnoor opened 5 years ago

zsnoor commented 5 years ago

Hi,

I wasn't clear from the documentation on the type of input file from WGBS data that it takes. Does it take BedGraph, a Bismark coverage file, or bed file?

Thank you very much, Zo

Christensen-Lab commented 5 years ago

BED file. line 24 of methyliftover.R. Thanks.