ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.
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'module' object has no attribute 'FileList' when calling "stat.calculateStatistics" #21
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vzickus opened 5 years ago
I tried tracking this down, but I cannot seem to find the exact location where the FileList is messed up. This is following the tutorial here: https://rawgit.com/ChristophKirst/ClearMap/master/docs/_build/html/imageanalysis.html
settings.ClearMapPath /home/vzickus/anaconda3/envs/Python27/lib/python2.7/site-packages/ClearMap-0.9.2-py2.7-linux-x86_64.egg/ClearMap Traceback (most recent call last): File "clearmap_test.py", line 19, in <module> print stat.calculateStatistics(filename, method = 'mean') File "/home/vzickus/anaconda3/envs/Python27/lib/python2.7/site-packages/ClearMap-0.9.2-py2.7-linux-x86_64.egg/ClearMap/ImageProcessing/ImageStatistics.py", line 61, in calculateStatistics result = parallelProcessStack(source, sink = sink, function = calculateStatisticsOnStack, join = joinStatistics, method = method, remove= remove, verbose = verbose, **parameter); File "/home/vzickus/anaconda3/envs/Python27/lib/python2.7/site-packages/ClearMap-0.9.2-py2.7-linux-x86_64.egg/ClearMap/ImageProcessing/StackProcessing.py", line 422, in parallelProcessStack results = pool.map(_processSubStack, argdata); File "/home/vzickus/anaconda3/envs/Python27/lib/python2.7/multiprocessing/pool.py", line 253, in map return self.map_async(func, iterable, chunksize).get() File "/home/vzickus/anaconda3/envs/Python27/lib/python2.7/multiprocessing/pool.py", line 572, in get raise self._value AttributeError: 'module' object has no attribute 'FileList'