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ChristophKirst / ClearMap

ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.
http://christophkirst.github.io/ClearMap/build/html/index.html
GNU General Public License v3.0
49 stars 40 forks source link

Issue with Installation, setting.py specifically #41

Open Artem-ctrl opened 3 years ago

Artem-ctrl commented 3 years ago

Hello,

I am trying to confirm my setup of Clearmap, I am following instructions on http://christophkirst.github.io/ClearMap/build/html/installation.html , running on Windows 10. Setting up the setting.py file I get this issue when I try to run the code:

print 'Settings: elastix path %s does not exists, cf. Settings.py or type help(Settings) for details.' % ElastixPath; ^ SyntaxError: invalid syntax

This is after I gave location to ilastik and elastix in lines 50-55.

Any help on this issue would be appreciated.

Artem-ctrl commented 3 years ago

Another issue I come across is this:

ModuleNotFoundError: No module named 'ClearMap'

Does this mean i am not point python to the correct location of Clearmap? Thanks

sercrucan commented 3 years ago

Hello, did you find any solution for this? thanks

Xiaoyan3333 commented 2 years ago

maybe it's because ClearMap was written in Ubuntu? There are some packages that cannot found in Windows.