ChristophKirst / ClearMap

ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.
http://christophkirst.github.io/ClearMap/build/html/index.html
GNU General Public License v3.0
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Interfacing Ilastik #42

Closed bhnrus closed 3 years ago

bhnrus commented 3 years ago

Hi All, Has anyone used the Ilastik interface? I'm having some trouble understanding which filename I'm supposed to right in the input and output of Ilastik in imageprocessing.ilastik.ilastik.py code. Does the 'source' and 'sink' needs to be the file paths for the raw images? Best, Nimrod