Hello I am facing an issue when conducting transformation of point coordinates.
I am working with a new environment on a cluster computer.
The error I am facing is below, it seems like when I run the transformPoints function, it is not able to refer to 'elastix_input.txt' file.
I am not finding where this file is or what it is.
Can anyone help me out here?
>>> points = transformPoints(points, transformDirectory = CorrectionAlignmentParameter["resultDirectory"], indices = False, resultDirectory = None);
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/.../ClearMap/ClearMap/Alignment/Elastix.py", line 709, in transformPoints
tmpFile = os.path.join(tempfile.tempdir, 'elastix_input.txt');
File "/.../miniconda3/envs/ClearMap1/lib/python2.7/posixpath.py", line 70, in join
elif path == '' or path.endswith('/'):
AttributeError: 'NoneType' object has no attribute 'endswith'
Hello I am facing an issue when conducting transformation of point coordinates. I am working with a new environment on a cluster computer. The error I am facing is below, it seems like when I run the transformPoints function, it is not able to refer to 'elastix_input.txt' file. I am not finding where this file is or what it is. Can anyone help me out here?