check parameter values

[ChristopherBarrington]

• [ ] missing values
• [ ] incorrect formats
• [ ] unexpected values

8

[ChristopherBarrington]

.collect{it + ['feature identifiers': get_default_value(it, 'feature identifiers', 'name')]}

def get_default_value(map, key, default_value) {
    map.get(key, default_value) ?: default_value
}

[ChristopherBarrington]

• add section in workflow readme for parameter keys that it uses
• load the scamp parameters yaml as a definition of what each parameter is
• load the stage/workflow readme and get the expected parameter values
• compare the defined and permitted parameters