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ChristopherBarrington / scamp

single cell analysis and more pipeline
https://christopherbarrington.github.io/scamp/
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clarify optional args for documentation #64

Closed ChristopherBarrington closed 12 months ago

ChristopherBarrington commented 1 year ago

some arguments will be guessed by scamp, other must be in the params and some will be filled in by scamp processes. maybe a red/orange/green?

ChristopherBarrington commented 1 year ago

maybe

provider: [user,guess,process]
ChristopherBarrington commented 12 months ago

maybe

provider: [<parameter key>, '{scamp} defaults', '{scamp} process']
ChristopherBarrington commented 12 months ago

https://github.com/ChristopherBarrington/scamp/blob/099adddf29460ad17b0677fab047a023b932d995/docs/layouts/partials/nf-workflow-doc.html#L52