Open yanyew opened 2 years ago
When I'm running iqtree -s A.trimal -m MFP -bb 1000 -bnni -pre A -st AA -redo -T AUTO, I got the error information as blow:
iqtree -s A.trimal -m MFP -bb 1000 -bnni -pre A -st AA -redo -T AUTO
WARNING: Please only use GTR20 with very large data and always test for model fit! ERROR: checkpoint.h:216: bool Checkpoint::getArray(std::string, int, T) [with T = double; std::string = std::__cxx11::basic_string]: Assertion `next_pos == string::npos' failed. ERROR: STACK TRACE FOR DEBUGGING: ERROR: 1 funcAbort() ERROR: 2 () ERROR: 3 gsignal() ERROR: 4 abort() ERROR: 5 () ERROR: 6 () ERROR: 7 ModelProtein::restoreCheckpoint() ERROR: 8 ModelFactory::restoreCheckpoint() ERROR: 9 CandidateModel::evaluate[abi:cxx11](Params&, ModelCheckpoint&, ModelCheckpoint&, ModelsBlock, int&, int) ERROR: 10 CandidateModelSet::test(Params&, PhyloTree, ModelCheckpoint&, ModelsBlock, int, int, std::cxx11::basic_string<char, std::char_traits, std::allocator >, std::cxx11::basic_string<char, std::char_traits, std::allocator >, bool) ERROR: 11 runModelFinder(Params&, IQTree&, ModelCheckpoint&) ERROR: 12 startTreeReconstruction(Params&, IQTree&, ModelCheckpoint&) ERROR: 13 runPhyloAnalysis(Params&, Checkpoint, IQTree&, Alignment&) ERROR: 14 runPhyloAnalysis(Params&, Checkpoint*) ERROR: 15 main() ERROR: 16 __libc_start_main() ERROR: 17 () ERROR: ERROR: IQ-TREE CRASHES WITH SIGNAL ABORTED ERROR: For bug report please send to developers: ERROR: *** Log file: MYB_fulllength.log
What's the problem with it? Look forward to your reply. Thanks!
When I'm running
iqtree -s A.trimal -m MFP -bb 1000 -bnni -pre A -st AA -redo -T AUTO
, I got the error information as blow:WARNING: Please only use GTR20 with very large data and always test for model fit! ERROR: checkpoint.h:216: bool Checkpoint::getArray(std::string, int, T) [with T = double; std::string = std::__cxx11::basic_string]: Assertion `next_pos == string::npos' failed.
ERROR: STACK TRACE FOR DEBUGGING:
ERROR: 1 funcAbort()
ERROR: 2 ()
ERROR: 3 gsignal()
ERROR: 4 abort()
ERROR: 5 ()
ERROR: 6 ()
ERROR: 7 ModelProtein::restoreCheckpoint()
ERROR: 8 ModelFactory::restoreCheckpoint()
ERROR: 9 CandidateModel::evaluate[abi:cxx11](Params&, ModelCheckpoint&, ModelCheckpoint&, ModelsBlock , int&, int)
ERROR: 10 CandidateModelSet::test(Params&, PhyloTree, ModelCheckpoint&, ModelsBlock, int, int, std::cxx11::basic_string<char, std::char_traits, std::allocator >, std:: cxx11::basic_string<char, std::char_traits, std::allocator >, bool)
ERROR: 11 runModelFinder(Params&, IQTree&, ModelCheckpoint&)
ERROR: 12 startTreeReconstruction(Params&, IQTree&, ModelCheckpoint&)
ERROR: 13 runPhyloAnalysis(Params&, Checkpoint, IQTree&, Alignment&)
ERROR: 14 runPhyloAnalysis(Params&, Checkpoint*)
ERROR: 15 main()
ERROR: 16 __libc_start_main()
ERROR: 17 ()
ERROR:
ERROR: IQ-TREE CRASHES WITH SIGNAL ABORTED
ERROR: For bug report please send to developers:
ERROR: *** Log file: MYB_fulllength.log
What's the problem with it? Look forward to your reply. Thanks!