Error in xgb.get.handle(object): 'xgb.Booster' object is corrupted or is from an incompatible xgboost version

[domivika]

After successful alignment on the test data, just when starting Bambu, the pipeline crashes with the following message:

Mapping reads... Identifying isoforms with Bambu... Failed to create Bambu annotations, check logs file

the log file part regarding the issue:

--- Start generating read class files --- Error: BiocParallel errors 1 remote errors, element index: 1 0 unevaluated and other errors first remote error: Error in xgb.get.handle(object): 'xgb.Booster' object is corrupted or is from an incompatible xgboost version. Execution halted

The process is run on the high-performance computing cluster, do you think the issue might be connected to that?

[domivika]

I actually already solved the issue, I just had to reinstall xgboost R package manually.