search

ClearVolume / clearvolume

ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. With ClearVolume you can see live on your screen the stacks acquired by your microscope instead of waiting for offline post-processing to give you an intuitive and comprehensive view on your data.
http://clearvolume.github.io
GNU Lesser General Public License v3.0
43 stars 11 forks source link

ClearVolume crashes #24

Closed ctrueden closed 7 years ago

ctrueden commented 9 years ago

From @acardona:

When opening the ClearVolume Network Client the whole JVM segfaults:

#
# A fatal error has been detected by the Java Runtime Environment:
#
#  SIGSEGV (0xb) at pc=0x00007f28a2d62d80, pid=27327, tid=139811869296384
#
# JRE version: Java(TM) SE Runtime Environment (7.0_67-b01) (build 1.7.0_67-b01)
# Java VM: Java HotSpot(TM) 64-Bit Server VM (24.65-b04 mixed mode linux-amd64 compressed oops)
# Problematic frame:
# C  [ld-linux-x86-64.so.2+0x9d80]  _dl_rtld_di_serinfo+0x670
#
# Failed to write core dump. Core dumps have been disabled. To enable core dumping, try "ulimit -c unlimited" before starting Java again
#
# An error report file with more information is saved as:
# /home/albert/Programming/fiji-linux64-20091014/Fiji.app/hs_err_pid27327.log
#
# If you would like to submit a bug report, please visit:
#   http://bugreport.sun.com/bugreport/crash.jsp
#
Aborted

Additionally, when using the "Open in ClearVolume", it fails with an exception if no images are open, and it throws an exception if an RGB stack is open, leaving the splash screen looping forever. Eventually the whole of Fiji freezes. The exception in the case of no images:

(Fiji Is Just) ImageJ 2.0.0-rc-30/1.49s; Java 1.7.0_67 [64-bit]; Linux 3.13.11-031311ckt16-generic; 59MB of 4096MB (1%)

java.lang.RuntimeException: java.util.concurrent.ExecutionException: java.lang.NullPointerException
  at net.imagej.legacy.LegacyService.runLegacyCompatibleCommand(LegacyService.java:271)
  at net.imagej.legacy.DefaultLegacyHooks.interceptRunPlugIn(DefaultLegacyHooks.java:162)
  at ij.IJ.runPlugIn(IJ.java)
  at ij.Executer.runCommand(Executer.java:131)
  at ij.Executer.run(Executer.java:64)
  at java.lang.Thread.run(Thread.java:745)
Caused by: java.util.concurrent.ExecutionException: java.lang.NullPointerException
  at java.util.concurrent.FutureTask.report(FutureTask.java:122)
  at java.util.concurrent.FutureTask.get(FutureTask.java:188)
  at net.imagej.legacy.LegacyService.runLegacyCompatibleCommand(LegacyService.java:267)
  ... 5 more
Caused by: java.lang.NullPointerException
  at net.imagej.legacy.translate.ImagePlusDatasetConverter.populateInputCandidates(ImagePlusDatasetConverter.java:126)
  at org.scijava.convert.DefaultConvertService.getCompatibleInputs(DefaultConvertService.java:111)
  at org.scijava.widget.AbstractInputHarvester.getObjects(AbstractInputHarvester.java:153)
  at org.scijava.widget.AbstractInputHarvester.addInput(AbstractInputHarvester.java:128)
  at org.scijava.widget.AbstractInputHarvester.buildPanel(AbstractInputHarvester.java:94)
  at org.scijava.widget.AbstractInputHarvester.harvest(AbstractInputHarvester.java:75)
  at org.scijava.ui.AbstractInputHarvesterPlugin.process(AbstractInputHarvesterPlugin.java:76)
  at org.scijava.module.ModuleRunner.preProcess(ModuleRunner.java:104)
  at org.scijava.module.ModuleRunner.run(ModuleRunner.java:156)
  at org.scijava.module.ModuleRunner.call(ModuleRunner.java:126)
  at org.scijava.module.ModuleRunner.call(ModuleRunner.java:65)
  at org.scijava.thread.DefaultThreadService$2.call(DefaultThreadService.java:181)
  at java.util.concurrent.FutureTask.run(FutureTask.java:262)
  at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
  at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
  ... 1 more

And the exception in the case of an RGB image stack being open:

(Fiji Is Just) ImageJ 2.0.0-rc-30/1.49s; Java 1.7.0_67 [64-bit]; Linux 3.13.11-031311ckt16-generic; 75MB of 4096MB (1%)

java.lang.RuntimeException: java.util.concurrent.ExecutionException: java.lang.NullPointerException
  at net.imagej.legacy.LegacyService.runLegacyCompatibleCommand(LegacyService.java:271)
  at net.imagej.legacy.DefaultLegacyHooks.interceptRunPlugIn(DefaultLegacyHooks.java:162)
  at ij.IJ.runPlugIn(IJ.java)
  at ij.Executer.runCommand(Executer.java:131)
  at ij.Executer.run(Executer.java:64)
  at java.lang.Thread.run(Thread.java:745)
Caused by: java.util.concurrent.ExecutionException: java.lang.NullPointerException
  at java.util.concurrent.FutureTask.report(FutureTask.java:122)
  at java.util.concurrent.FutureTask.get(FutureTask.java:188)
  at net.imagej.legacy.LegacyService.runLegacyCompatibleCommand(LegacyService.java:267)
  ... 5 more
Caused by: java.lang.NullPointerException
  at de.mpicbg.jug.clearvolume.ImgLib2ClearVolume.initClearVolumeUnsignedShortArrayImg(ImgLib2ClearVolume.java:264)
  at de.mpicbg.jug.clearvolume.ImgLib2ClearVolume.initRealImgs(ImgLib2ClearVolume.java:418)
  at de.mpicbg.jug.clearvolume.gui.ClearVolumeManager.run(ClearVolumeManager.java:156)
  at de.mpicbg.jug.clearvolume.gui.GenericClearVolumeGui.launchClearVolumeManager(GenericClearVolumeGui.java:208)
  at de.mpicbg.jug.clearvolume.gui.GenericClearVolumeGui.<init>(GenericClearVolumeGui.java:135)
  at de.mpicbg.jug.plugins.ClearVolumePlugin.run(ClearVolumePlugin.java:80)
  at org.scijava.command.CommandModule.run(CommandModule.java:201)
  at org.scijava.module.ModuleRunner.run(ModuleRunner.java:167)
  at org.scijava.module.ModuleRunner.call(ModuleRunner.java:126)
  at org.scijava.module.ModuleRunner.call(ModuleRunner.java:65)
  at org.scijava.thread.DefaultThreadService$2.call(DefaultThreadService.java:181)
  at java.util.concurrent.FutureTask.run(FutureTask.java:262)
  at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
  at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
Information about your version of Java:
  os.arch => amd64
  os.name => Linux
  os.version => 3.13.11-031311ckt16-generic
  java.version => 1.7.0_67
  java.vendor => Oracle Corporation
  java.runtime.name => Java(TM) SE Runtime Environment
  java.runtime.version => 1.7.0_67-b01
  java.vm.name => Java HotSpot(TM) 64-Bit Server VM
  java.vm.version => 24.65-b04
  java.vm.vendor => Oracle Corporation
  java.vm.info => mixed mode
  java.awt.graphicsenv => sun.awt.X11GraphicsEnvironment
  java.specification.name => Java Platform API Specification
  java.specification.version => 1.7
  sun.cpu.endian => little
  sun.desktop => gnome
  file.separator => /

The up-to-date check says: REMIND_LATER

Information relevant to JAVA_HOME related problems:

  JAVA_HOME is set to: /home/albert/Programming/fiji-linux64-20091014/Fiji.app/java/linux-amd64/jdk1.7.0_67//jre
  imagej.dir => /home/albert/Programming/fiji-linux64-20091014/Fiji.app

Information about the version of each plugin:

Activated update sites:
ImageJ: http://update.imagej.net/ (last check:20150522062918)
Fiji: http://fiji.sc/update/ (last check:20150528120151)
ClearVolume: http://sites.imagej.net/ClearVolume/ (last check:20150527195605)
FFMPEG: http://fiji.sc/~schindelin/ffmpeg-plugins/ (last check:20130606112449)
MOSAIC ToolSuite: http://mosaic.mpi-cbg.de/Downloads/update/Fiji/MosaicToolsuite/ (last check:20150227140151)

Files not up-to-date:
  1581bc4d (MODIFIED) 20120131124042 Contents/MacOS/ImageJ-macosx
  75db148f (MODIFIED) 20120131124042 Contents/MacOS/ImageJ-tiger
  1ad3be0d (LOCAL_ONLY) 20090930112722 jars/jpedalSTD.jar
  32a5cb57 (LOCAL_ONLY) 20090910082726 macros/StartupMacros.txt
  dc7fce6b (LOCAL_ONLY) 20111014094119 plugins/Motion_Deblur.jar
  32738eb1 (LOCAL_ONLY) 20120511160900 plugins/SAT-lib-Drosophila-3rd-instar.clj
  3335decb (LOCAL_ONLY) 20101016092738 plugins/T2-NIT.jar
  063de9b3 (LOCAL_ONLY) 20150526100515 plugins/dynamic_vision_sensor-like.py
  7c95e931 (LOCAL_ONLY) 20140420121925 plugins/test_haskell_splitAt.py
  7f241f66 (LOCAL_ONLY) 20100603001850 plugins/tests/Example_Cursors.class
  a47f6af3 (LOCAL_ONLY) 20130425143259 plugins/tests/crop-file.py
  d3260180 (LOCAL_ONLY) 20090910082729 scripts/Record_Desktop.py
  0ea7f8fc (LOCAL_ONLY) 20090910082729 scripts/Record_Window.py

The original bug report is Fiji BugZilla #1076.

mabruce commented 9 years ago

I'm getting the same segfault, OpenJDK 7 or Oracle JDK 8 on Ubuntu 14.04, 64 bit.

royerloic commented 9 years ago

@mabruce : can you paste the exception and/or hs_err_pidXXXXX.log file contents please? What is your graphics card? which drivers do you have installed? what does glxinfo return? You need at least OpenGL 3.3 and OpenCL 1.1

mabruce commented 9 years ago

Last message spit to System.out/err is "com.apple.eawt.Application".

Main graphics card is NVIDIA Quadro K2200 running 346.46 drivers. Card/drivers fully support OpenGL 4.5. OpenCL 1.1 has been supported in NVIDIA drivers for several years.

hs_err is below.

#
# A fatal error has been detected by the Java Runtime Environment:
#
#  SIGSEGV (0xb) at pc=0x00007f80f9b3ed80, pid=7501, tid=140153879516928
#
# JRE version: Java(TM) SE Runtime Environment (8.0_45-b14) (build 1.8.0_45-b14)
# Java VM: Java HotSpot(TM) 64-Bit Server VM (25.45-b02 mixed mode linux-amd64 )
# Problematic frame:
# C  [ld-linux-x86-64.so.2+0x9d80]
#
# Failed to write core dump. Core dumps have been disabled. To enable core dumping, try "ulimit -c unlimited" before starting Java again
#
# If you would like to submit a bug report, please visit:
#   http://bugreport.java.com/bugreport/crash.jsp
# The crash happened outside the Java Virtual Machine in native code.
# See problematic frame for where to report the bug.
#

---------------  T H R E A D  ---------------

Current thread (0x0000000002492800):  JavaThread "SciJava-3d484181-Thread-1" [_thread_in_native, id=7541, stack(0x00007f781e23d000,0x00007f781e33e000)]

siginfo: si_signo: 11 (SIGSEGV), si_code: 1 (SEGV_MAPERR), si_addr: 0x0000000000000564

Registers:
RAX=0x0000000000000057, RBX=0x00007f781e3385f0, RCX=0x000000003c887d4c, RDX=0x00007f77c96aa26c
RSP=0x00007f781e338580, RBP=0x0000000000000560, RSI=0x00000000000002a8, RDI=0x0000000000000560
R8 =0x0000000000f221f5, R9 =0x00007f781e3385f0, R10=0x00007f781e3385f0, R11=0x00007f781e3386f0
R12=0x0000000000000003, R13=0x00007f78001984a0, R14=0x0000000000000000, R15=0x000000000000000d
RIP=0x00007f80f9b3ed80, EFLAGS=0x0000000000010202, CSGSFS=0x0000000000000033, ERR=0x0000000000000004
  TRAPNO=0x000000000000000e

Top of Stack: (sp=0x00007f781e338580)
0x00007f781e338580:   00007f781e338d60 000000003c887d4d
0x00007f781e338590:   0000000000000000 0000000000000003
0x00007f781e3385a0:   00007f78001984a0 00007f80f9b3f816
0x00007f781e3385b0:   00007f781e338640 00007f781e3385f0
0x00007f781e3385c0:   00000000000002a8 00007f781e338700
0x00007f781e3385d0:   00007f77c96aa26c 0000000000f221f5
0x00007f781e3385e0:   00007f781e3386f0 00007f781e3387e0
0x00007f781e3385f0:   0000000000000000 0000000000000000
0x00007f781e338600:   00007f78001a5de0 00007f780035af00
0x00007f781e338610:   00000000000006c8 0000000000000000
0x00007f781e338620:   0000000200000000 000000000000001d
0x00007f781e338630:   00007f77c98bc080 00007f781e3387e0
0x00007f781e338640:   00007f781e338790 0000000000000000
0x00007f781e338650:   0000000000000000 00007f78001a6168
0x00007f781e338660:   00007f78001a5de0 00007f80f9b3f991
0x00007f781e338670:   0000000000000000 0000000000000000
0x00007f781e338680:   0000000000000002 0000000000000000
0x00007f781e338690:   0000000000000000 00007f78001a5de0
0x00007f781e3386a0:   0000000000000558 00007f781e338ae0
0x00007f781e3386b0:   00007f78001f8a30 00007f780035ad70
0x00007f781e3386c0:   0000000000000000 00007f78001a6168
0x00007f781e3386d0:   00007f781e338700 00007f781e3386f0
0x00007f781e3386e0:   000000003c887d4d 00007f780035af00
0x00007f781e3386f0:   00000000ffffffff 00007f781e338ae0
0x00007f781e338700:   0000000000000000 0000000000000000
0x00007f781e338710:   00007f781e3387b0 00007f77c8e1bfc0
0x00007f781e338720:   00007f80f9b54500 00007f780035af00
0x00007f781e338730:   00007f80f9b513c7 00007f80f9b513c7
0x00007f781e338740:   00007f781e3387b0 00007f80f67fefe9
0x00007f781e338750:   0000000002492800 0000000002a243e0
0x00007f781e338760:   00007f782c5d63d0 0000000000e71790
0x00007f781e338770:   00007f80f9d57cc0 00007f780035af00 

Instructions: (pc=0x00007f80f9b3ed80)
0x00007f80f9b3ed60:   77 fd ff ff 66 2e 0f 1f 84 00 00 00 00 00 66 90
0x00007f80f9b3ed70:   41 55 41 54 55 48 89 fd 53 4c 89 d3 48 83 ec 08
0x00007f80f9b3ed80:   0f b6 47 04 83 e0 0f 48 83 7f 08 00 0f 84 13 01
0x00007f80f9b3ed90:   00 00 31 d2 66 83 7d 06 00 0f 94 c2 85 53 3c 0f 

Register to memory mapping:

RAX=0x0000000000000057 is an unknown value
RBX=0x00007f781e3385f0 is pointing into the stack for thread: 0x0000000002492800
RCX=0x000000003c887d4c is an unknown value
RDX=
[error occurred during error reporting (printing register info), id 0xb]

Stack: [0x00007f781e23d000,0x00007f781e33e000],  sp=0x00007f781e338580,  free space=1005k
Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native code)
C  [ld-linux-x86-64.so.2+0x9d80]

Java frames: (J=compiled Java code, j=interpreted, Vv=VM code)
J 2310  java.lang.ClassLoader$NativeLibrary.find(Ljava/lang/String;)J (0 bytes) @ 0x00007f80e120010c [0x00007f80e12000c0+0x4c]
j  java.lang.ClassLoader.findNative(Ljava/lang/ClassLoader;Ljava/lang/String;)J+49
v  ~StubRoutines::call_stub
j  jogamp.common.os.UnixDynamicLinkerImpl.dlopen(Ljava/lang/String;I)J+0
j  jogamp.common.os.PosixDynamicLinkerImpl.openLibraryGlobalImpl(Ljava/lang/String;)J+4
j  jogamp.common.os.DynamicLinkerImpl.openLibraryGlobal(Ljava/lang/String;Z)J+7
j  com.jogamp.common.os.NativeLibrary.open(Ljava/lang/String;Ljava/lang/String;Ljava/lang/String;ZLjava/lang/ClassLoader;Z)Lcom/jogamp/common/os/NativeLibrary;+206
j  com.jogamp.common.os.NativeLibrary.open(Ljava/lang/String;Ljava/lang/ClassLoader;Z)Lcom/jogamp/common/os/NativeLibrary;+6
j  com.jogamp.common.os.DynamicLibraryBundle.loadFirstAvailable(Ljava/util/List;Ljava/lang/ClassLoader;Z)Lcom/jogamp/common/os/NativeLibrary;+24
j  com.jogamp.common.os.DynamicLibraryBundle.loadLibraries()Lcom/jogamp/common/os/DynamicLinker;+81
j  com.jogamp.common.os.DynamicLibraryBundle$1.run()V+9
j  com.jogamp.common.util.RunnableExecutor$CurrentThreadExecutor.invoke(ZLjava/lang/Runnable;)V+1
j  com.jogamp.common.os.DynamicLibraryBundle.<init>(Lcom/jogamp/common/os/DynamicLibraryBundleInfo;)V+260
j  jogamp.opengl.GLDynamicLookupHelper.<init>(Ljogamp/opengl/GLDynamicLibraryBundleInfo;)V+2
j  jogamp.opengl.DesktopGLDynamicLookupHelper.<init>(Ljogamp/opengl/DesktopGLDynamicLibraryBundleInfo;)V+2
j  jogamp.opengl.x11.glx.X11GLXDrawableFactory$1.run()Ljogamp/opengl/DesktopGLDynamicLookupHelper;+11
j  jogamp.opengl.x11.glx.X11GLXDrawableFactory$1.run()Ljava/lang/Object;+1
v  ~StubRoutines::call_stub
J 1838  java.security.AccessController.doPrivileged(Ljava/security/PrivilegedAction;)Ljava/lang/Object; (0 bytes) @ 0x00007f80e1696fcf [0x00007f80e1696f80+0x4f]
j  jogamp.opengl.x11.glx.X11GLXDrawableFactory.<init>()V+24
v  ~StubRoutines::call_stub
J 2549  sun.reflect.NativeConstructorAccessorImpl.newInstance0(Ljava/lang/reflect/Constructor;[Ljava/lang/Object;)Ljava/lang/Object; (0 bytes) @ 0x00007f80e14c6ea3 [0x00007f80e14c6e40+0x63]
J 2548 C1 sun.reflect.NativeConstructorAccessorImpl.newInstance([Ljava/lang/Object;)Ljava/lang/Object; (89 bytes) @ 0x00007f80e1501f84 [0x00007f80e1500f80+0x1004]
J 767 C1 sun.reflect.DelegatingConstructorAccessorImpl.newInstance([Ljava/lang/Object;)Ljava/lang/Object; (9 bytes) @ 0x00007f80e12ff904 [0x00007f80e12ff800+0x104]
J 764 C1 java.lang.reflect.Constructor.newInstance([Ljava/lang/Object;)Ljava/lang/Object; (87 bytes) @ 0x00007f80e1300184 [0x00007f80e12ffcc0+0x4c4]
j  com.jogamp.common.util.ReflectionUtil.createInstance(Ljava/lang/reflect/Constructor;[Ljava/lang/Object;)Ljava/lang/Object;+2
j  com.jogamp.common.util.ReflectionUtil.createInstance(Ljava/lang/Class;[Ljava/lang/Class;[Ljava/lang/Object;)Ljava/lang/Object;+6
j  com.jogamp.common.util.ReflectionUtil.createInstance(Ljava/lang/String;[Ljava/lang/Class;[Ljava/lang/Object;Ljava/lang/ClassLoader;)Ljava/lang/Object;+8
j  com.jogamp.common.util.ReflectionUtil.createInstance(Ljava/lang/String;Ljava/lang/ClassLoader;)Ljava/lang/Object;+4
j  com.jogamp.opengl.GLDrawableFactory.initSingletonImpl()V+179
j  com.jogamp.opengl.GLDrawableFactory.initSingleton()V+21
j  com.jogamp.opengl.GLProfile.initProfilesForDefaultDevices()V+109
j  com.jogamp.opengl.GLProfile.access$000()V+0
j  com.jogamp.opengl.GLProfile$1.run()Ljava/lang/Object;+58
v  ~StubRoutines::call_stub
J 1838  java.security.AccessController.doPrivileged(Ljava/security/PrivilegedAction;)Ljava/lang/Object; (0 bytes) @ 0x00007f80e1696fcf [0x00007f80e1696f80+0x4f]
j  com.jogamp.opengl.GLProfile.initSingleton()V+78
j  com.jogamp.opengl.GLProfile.getProfileMap(Lcom/jogamp/nativewindow/AbstractGraphicsDevice;Z)Ljava/util/HashMap;+0
j  com.jogamp.opengl.GLProfile.get(Lcom/jogamp/nativewindow/AbstractGraphicsDevice;Ljava/lang/String;)Lcom/jogamp/opengl/GLProfile;+16
j  com.jogamp.opengl.GLProfile.get(Ljava/lang/String;)Lcom/jogamp/opengl/GLProfile;+4
j  clearvolume.renderer.cleargl.ClearGLVolumeRenderer.<clinit>()V+19
v  ~StubRoutines::call_stub
j  clearvolume.renderer.factory.ClearVolumeRendererFactory.newOpenCLRenderer(Ljava/lang/String;IILcoremem/types/NativeTypeEnum;IIIZ)Lclearvolume/renderer/ClearVolumeRendererInterface;+25
j  de.mpicbg.jug.clearvolume.ImgLib2ClearVolume.initClearVolumeUnsignedShortArrayImg(Ljava/util/List;Ljava/lang/String;IIIIZZ)Lclearvolume/renderer/ClearVolumeRendererInterface;+52
j  de.mpicbg.jug.clearvolume.ImgLib2ClearVolume.initRealImgs(Ljava/util/List;Ljava/lang/String;IIIIZ[D[DZ)Lclearvolume/renderer/ClearVolumeRendererInterface;+19
j  de.mpicbg.jug.clearvolume.gui.ClearVolumeManager.run()V+36
j  de.mpicbg.jug.clearvolume.gui.GenericClearVolumeGui.launchClearVolumeManager()V+220
j  de.mpicbg.jug.clearvolume.gui.GenericClearVolumeGui.<init>(Lnet/imagej/ImgPlus;IZ)V+47
j  de.mpicbg.jug.plugins.ClearVolumePlugin.run()V+158
j  org.scijava.command.CommandModule.run()V+4
j  org.scijava.module.ModuleRunner.run()V+144
j  org.scijava.module.ModuleRunner.call()Lorg/scijava/module/Module;+1
j  org.scijava.module.ModuleRunner.call()Ljava/lang/Object;+1
j  org.scijava.thread.DefaultThreadService$2.call()Ljava/lang/Object;+28
j  java.util.concurrent.FutureTask.run()V+42
j  java.util.concurrent.ThreadPoolExecutor.runWorker(Ljava/util/concurrent/ThreadPoolExecutor$Worker;)V+95
j  java.util.concurrent.ThreadPoolExecutor$Worker.run()V+5
j  java.lang.Thread.run()V+11
v  ~StubRoutines::call_stub

---------------  P R O C E S S  ---------------

Java Threads: ( => current thread )
  0x00007f7800197800 JavaThread "process reaper" daemon [_thread_blocked, id=7641, stack(0x00007f781d40d000,0x00007f781d446000)]
  0x00007f7804098800 JavaThread "TimerQueue" daemon [_thread_blocked, id=7629, stack(0x00007f781c72a000,0x00007f781c82b000)]
  0x00007f780003a800 JavaThread "Thread-3" daemon [_thread_blocked, id=7628, stack(0x00007f781c82b000,0x00007f781c92c000)]
  0x00007f7800027800 JavaThread "SciJava-3d484181-Thread-11" [_thread_blocked, id=7627, stack(0x00007f781c326000,0x00007f781c427000)]
  0x00007f77e8001000 JavaThread "SciJava-3d484181-Thread-10" [_thread_blocked, id=7626, stack(0x00007f781c124000,0x00007f781c225000)]
  0x00007f7804093800 JavaThread "Open in ClearVolume" [_thread_blocked, id=7617, stack(0x00007f781d7ab000,0x00007f781d8ac000)]
  0x00007f80f004f000 JavaThread "zSelector" [_thread_blocked, id=7589, stack(0x00007f781d4aa000,0x00007f781d5ab000)]
  0x0000000000e74800 JavaThread "DestroyJavaVM" [_thread_blocked, id=7501, stack(0x00007fffdecb1000,0x00007fffdedb1000)]
  0x0000000002510800 JavaThread "Image Fetcher 0" daemon [_thread_blocked, id=7542, stack(0x00007f781df3c000,0x00007f781e03d000)]
=>0x0000000002492800 JavaThread "SciJava-3d484181-Thread-1" [_thread_in_native, id=7541, stack(0x00007f781e23d000,0x00007f781e33e000)]
  0x0000000002479800 JavaThread "Timer-0" daemon [_thread_blocked, id=7540, stack(0x00007f781e53e000,0x00007f781e63f000)]
  0x0000000002981000 JavaThread "SciJava-3d484181-Thread-0" [_thread_blocked, id=7539, stack(0x00007f781ee56000,0x00007f781ef57000)]
  0x0000000002908800 JavaThread "AWT-EventQueue-0" [_thread_blocked, id=7537, stack(0x00007f781ef57000,0x00007f781f058000)]
  0x0000000002907800 JavaThread "AWT-Shutdown" [_thread_blocked, id=7536, stack(0x00007f781f058000,0x00007f781f159000)]
  0x0000000002451800 JavaThread "AWT-XAWT" daemon [_thread_in_native, id=7535, stack(0x00007f781f359000,0x00007f781f45a000)]
  0x000000000243d000 JavaThread "Java2D Disposer" daemon [_thread_blocked, id=7534, stack(0x00007f781f45a000,0x00007f781f55b000)]
  0x0000000000fd1800 JavaThread "Service Thread" daemon [_thread_blocked, id=7523, stack(0x00007f80c036b000,0x00007f80c046c000)]
  0x0000000000fc4800 JavaThread "C1 CompilerThread3" daemon [_thread_blocked, id=7522, stack(0x00007f80c046c000,0x00007f80c056d000)]
  0x0000000000fc2800 JavaThread "C2 CompilerThread2" daemon [_thread_blocked, id=7521, stack(0x00007f80c056d000,0x00007f80c066e000)]
  0x0000000000fc0000 JavaThread "C2 CompilerThread1" daemon [_thread_in_native, id=7520, stack(0x00007f80c066e000,0x00007f80c076f000)]
  0x0000000000fbe000 JavaThread "C2 CompilerThread0" daemon [_thread_in_native, id=7519, stack(0x00007f80c076f000,0x00007f80c0870000)]
  0x0000000000fbc000 JavaThread "Signal Dispatcher" daemon [_thread_blocked, id=7518, stack(0x00007f80c0870000,0x00007f80c0971000)]
  0x0000000000fba800 JavaThread "Surrogate Locker Thread (Concurrent GC)" daemon [_thread_blocked, id=7517, stack(0x00007f80c0971000,0x00007f80c0a72000)]
  0x0000000000f83800 JavaThread "Finalizer" daemon [_thread_blocked, id=7516, stack(0x00007f80c0a72000,0x00007f80c0b73000)]
  0x0000000000f81800 JavaThread "Reference Handler" daemon [_thread_blocked, id=7515, stack(0x00007f80c0b73000,0x00007f80c0c74000)]

Other Threads:
  0x0000000000f7c800 VMThread [stack: 0x00007f80c0c74000,0x00007f80c0d75000] [id=7514]
  0x0000000000fd4800 WatcherThread [stack: 0x00007f80c026a000,0x00007f80c036b000] [id=7524]

VM state:not at safepoint (normal execution)

VM Mutex/Monitor currently owned by a thread: None

Heap:
 par new generation   total 231616K, used 134908K [0x00007f787da00000, 0x00007f788d550000, 0x00007f78a7390000)
  eden space 205888K,  53% used [0x00007f787da00000, 0x00007f788449f3b8, 0x00007f788a310000)
  from space 25728K, 100% used [0x00007f788a310000, 0x00007f788bc30000, 0x00007f788bc30000)
  to   space 25728K,   0% used [0x00007f788bc30000, 0x00007f788bc30000, 0x00007f788d550000)
 concurrent mark-sweep generation total 514752K, used 39672K [0x00007f78a7390000, 0x00007f78c6a40000, 0x00007f80bc000000)
 Metaspace       used 43511K, capacity 43903K, committed 44260K, reserved 45056K

Card table byte_map: [0x00007f787980c000,0x00007f787da00000] byte_map_base: 0x00007f38bd41f000

Marking Bits: (CMSBitMap*) 0x0000000000efd978
 Bits: [0x00007f7855233000, 0x00007f7875764c00)

Mod Union Table: (CMSBitMap*) 0x0000000000efda38
 Bits: [0x00007f80e05e9000, 0x00007f80e0dfdc70)

Polling page: 0x00007f80f9d4c000

CodeCache: size=245760Kb used=10714Kb max_used=10714Kb free=235045Kb
 bounds [0x00007f80e1000000, 0x00007f80e1a90000, 0x00007f80f0000000]
 total_blobs=4145 nmethods=3159 adapters=898
 compilation: enabled

Compilation events (10 events):
Event: 9.471 Thread 0x0000000000fc4800 nmethod 3674 0x00007f80e1a5b150 code [0x00007f80e1a5b2c0, 0x00007f80e1a5b490]
Event: 9.471 Thread 0x0000000000fc4800 3675       3       sun.java2d.xr.XRRenderer$XRDrawHandler::drawScanline (19 bytes)
Event: 9.471 Thread 0x0000000000fc4800 nmethod 3675 0x00007f80e1a5acd0 code [0x00007f80e1a5ae40, 0x00007f80e1a5b068]
Event: 9.479 Thread 0x0000000000fc2800 nmethod 3614 0x00007f80e1a62bd0 code [0x00007f80e1a63060, 0x00007f80e1a68030]
Event: 9.480 Thread 0x0000000000fc2800 3672       4       sun.java2d.SunGraphics2D::invalidatePipe (41 bytes)
Event: 9.480 Thread 0x0000000000fc2800 nmethod 3672 0x00007f80e1a4f4d0 code [0x00007f80e1a4f620, 0x00007f80e1a4f6b8]
Event: 9.563 Thread 0x0000000000fc4800 3676       3       java.awt.Component$1::isDisplayable (13 bytes)
Event: 9.563 Thread 0x0000000000fc4800 nmethod 3676 0x00007f80e1a82f50 code [0x00007f80e1a830c0, 0x00007f80e1a83270]
Event: 9.570 Thread 0x0000000000fc4800 3677       3       java.awt.Component::repaint (16 bytes)
Event: 9.571 Thread 0x0000000000fc4800 nmethod 3677 0x00007f80e1a83c90 code [0x00007f80e1a83e00, 0x00007f80e1a84028]

GC Heap History (4 events):
Event: 1.546 GC heap before
{Heap before GC invocations=0 (full 0):
 par new generation   total 231616K, used 205888K [0x00007f787da00000, 0x00007f788d550000, 0x00007f78a7390000)
  eden space 205888K, 100% used [0x00007f787da00000, 0x00007f788a310000, 0x00007f788a310000)
  from space 25728K,   0% used [0x00007f788a310000, 0x00007f788a310000, 0x00007f788bc30000)
  to   space 25728K,   0% used [0x00007f788bc30000, 0x00007f788bc30000, 0x00007f788d550000)
 concurrent mark-sweep generation total 514752K, used 0K [0x00007f78a7390000, 0x00007f78c6a40000, 0x00007f80bc000000)
 Metaspace       used 19994K, capacity 20315K, committed 20480K, reserved 20480K
Event: 1.570 GC heap after
Heap after GC invocations=1 (full 0):
 par new generation   total 231616K, used 20969K [0x00007f787da00000, 0x00007f788d550000, 0x00007f78a7390000)
  eden space 205888K,   0% used [0x00007f787da00000, 0x00007f787da00000, 0x00007f788a310000)
  from space 25728K,  81% used [0x00007f788bc30000, 0x00007f788d0aa7e8, 0x00007f788d550000)
  to   space 25728K,   0% used [0x00007f788a310000, 0x00007f788a310000, 0x00007f788bc30000)
 concurrent mark-sweep generation total 514752K, used 0K [0x00007f78a7390000, 0x00007f78c6a40000, 0x00007f80bc000000)
 Metaspace       used 19994K, capacity 20315K, committed 20480K, reserved 20480K
}
Event: 8.418 GC heap before
{Heap before GC invocations=1 (full 1):
 par new generation   total 231616K, used 226858K [0x00007f787da00000, 0x00007f788d550000, 0x00007f78a7390000)
  eden space 205888K, 100% used [0x00007f787da00000, 0x00007f788a310000, 0x00007f788a310000)
  from space 25728K,  81% used [0x00007f788bc30000, 0x00007f788d0aa828, 0x00007f788d550000)
  to   space 25728K,   0% used [0x00007f788a310000, 0x00007f788a310000, 0x00007f788bc30000)
 concurrent mark-sweep generation total 514752K, used 0K [0x00007f78a7390000, 0x00007f78c6a40000, 0x00007f80bc000000)
 Metaspace       used 37211K, capacity 37566K, committed 37820K, reserved 38912K
Event: 8.483 GC heap after
Heap after GC invocations=2 (full 1):
 par new generation   total 231616K, used 25728K [0x00007f787da00000, 0x00007f788d550000, 0x00007f78a7390000)
  eden space 205888K,   0% used [0x00007f787da00000, 0x00007f787da00000, 0x00007f788a310000)
  from space 25728K, 100% used [0x00007f788a310000, 0x00007f788bc30000, 0x00007f788bc30000)
  to   space 25728K,   0% used [0x00007f788bc30000, 0x00007f788bc30000, 0x00007f788d550000)
 concurrent mark-sweep generation total 514752K, used 39672K [0x00007f78a7390000, 0x00007f78c6a40000, 0x00007f80bc000000)
 Metaspace       used 37211K, capacity 37566K, committed 37820K, reserved 38912K
}

Deoptimization events (10 events):
Event: 8.820 Thread 0x0000000002492800 Uncommon trap: reason=class_check action=maybe_recompile pc=0x00007f80e19524f8 method=net.imglib2.img.array.AbstractArrayLocalizingCursor.fwd()V @ 4
Event: 8.820 Thread 0x0000000002492800 Uncommon trap: reason=class_check action=maybe_recompile pc=0x00007f80e19524f8 method=net.imglib2.img.array.AbstractArrayLocalizingCursor.fwd()V @ 4
Event: 8.820 Thread 0x0000000002492800 Uncommon trap: reason=class_check action=maybe_recompile pc=0x00007f80e19524f8 method=net.imglib2.img.array.AbstractArrayLocalizingCursor.fwd()V @ 4
Event: 8.845 Thread 0x0000000002492800 Uncommon trap: reason=unstable_if action=reinterpret pc=0x00007f80e153fbb8 method=net.imglib2.img.planar.PlanarRandomAccess.setPosition(Lnet/imglib2/Localizable;)V @ 78
Event: 8.866 Thread 0x0000000002492800 Uncommon trap: reason=unstable_if action=reinterpret pc=0x00007f80e19bafc4 method=net.imglib2.img.planar.PlanarRandomAccess.setPosition(Lnet/imglib2/Localizable;)V @ 78
Event: 8.977 Thread 0x0000000002492800 Uncommon trap: reason=unstable_if action=reinterpret pc=0x00007f80e19bd6d8 method=java.lang.Math.max(DD)D @ 17
Event: 9.131 Thread 0x0000000002492800 Uncommon trap: reason=unstable_if action=reinterpret pc=0x00007f80e19c18bc method=de.mpicbg.jug.clearvolume.ImgLib2ClearVolume.copy(Lnet/imglib2/RandomAccessible;Lnet/imglib2/IterableInterval;Lnet/imglib2/converter/Converter;)V @ 63
Event: 9.140 Thread 0x0000000002492800 Uncommon trap: reason=unstable_if action=reinterpret pc=0x00007f80e1784e9c method=java.io.File.getName()Ljava/lang/String; @ 16
Event: 9.170 Thread 0x0000000002492800 Uncommon trap: reason=unstable_if action=reinterpret pc=0x00007f80e14b36ec method=sun.reflect.annotation.AnnotationParser.parseArray(Ljava/lang/Class;Ljava/nio/ByteBuffer;Lsun/reflect/ConstantPool;Ljava/lang/Class;)Ljava/lang/Object; @ 179
Event: 9.223 Thread 0x0000000002492800 Uncommon trap: reason=unstable_if action=reinterpret pc=0x00007f80e123a6bc method=java.lang.ThreadLocal$ThreadLocalMap.getEntry(Ljava/lang/ThreadLocal;)Ljava/lang/ThreadLocal$ThreadLocalMap$Entry; @ 29

Internal exceptions (10 events):
Event: 9.249 Thread 0x0000000002492800 Exception <a 'java/lang/NoSuchMethodError': clEnqueueWaitForEvents> (0x00007f7882407fb0) thrown at [/RE-WORK/workspace/8-2-build-linux-amd64/jdk8u45/3457/hotspot/src/share/vm/prims/jni.cpp, line 1598]
Event: 9.249 Thread 0x0000000002492800 Exception <a 'java/lang/NoSuchMethodError': clEnqueueBarrier> (0x00007f7882408298) thrown at [/RE-WORK/workspace/8-2-build-linux-amd64/jdk8u45/3457/hotspot/src/share/vm/prims/jni.cpp, line 1598]
Event: 9.249 Thread 0x0000000002492800 Exception <a 'java/lang/NoSuchMethodError': clGetExtensionFunctionAddress> (0x00007f78824085a0) thrown at [/RE-WORK/workspace/8-2-build-linux-amd64/jdk8u45/3457/hotspot/src/share/vm/prims/jni.cpp, line 1598]
Event: 9.249 Thread 0x0000000002492800 Exception <a 'java/lang/NoSuchMethodError': clCreateFromGLTexture> (0x00007f7882408898) thrown at [/RE-WORK/workspace/8-2-build-linux-amd64/jdk8u45/3457/hotspot/src/share/vm/prims/jni.cpp, line 1598]
Event: 9.249 Thread 0x0000000002492800 Exception <a 'java/lang/NoSuchMethodError': clGetGLObjectInfo> (0x00007f7882408b88) thrown at [/RE-WORK/workspace/8-2-build-linux-amd64/jdk8u45/3457/hotspot/src/share/vm/prims/jni.cpp, line 1598]
Event: 9.249 Thread 0x0000000002492800 Exception <a 'java/lang/NoSuchMethodError': clGetGLTextureInfo> (0x00007f7882408e78) thrown at [/RE-WORK/workspace/8-2-build-linux-amd64/jdk8u45/3457/hotspot/src/share/vm/prims/jni.cpp, line 1598]
Event: 9.249 Thread 0x0000000002492800 Exception <a 'java/lang/NoSuchMethodError': clEnqueueAcquireGLObjects> (0x00007f7882409178) thrown at [/RE-WORK/workspace/8-2-build-linux-amd64/jdk8u45/3457/hotspot/src/share/vm/prims/jni.cpp, line 1598]
Event: 9.249 Thread 0x0000000002492800 Exception <a 'java/lang/NoSuchMethodError': clEnqueueReleaseGLObjects> (0x00007f7882409478) thrown at [/RE-WORK/workspace/8-2-build-linux-amd64/jdk8u45/3457/hotspot/src/share/vm/prims/jni.cpp, line 1598]
Event: 9.251 Thread 0x0000000002492800 Exception <a 'java/lang/UnsatisfiedLinkError': com.nativelibs4java.opencl.library.OpenCLLibrary.clIcdGetPlatformIDsKHR(IJJ)I> (0x00007f78824b50a0) thrown at [/RE-WORK/workspace/8-2-build-linux-amd64/jdk8u45/3457/hotspot/src/share/vm/prims/nativeLookup.cpp
Event: 9.312 Thread 0x0000000002492800 Exception <a 'java/io/FileNotFoundException'> (0x00007f7882c43fa0) thrown at [/RE-WORK/workspace/8-2-build-linux-amd64/jdk8u45/3457/hotspot/src/share/vm/prims/jni.cpp, line 709]

Events (10 events):
Event: 9.581 loading class com/jogamp/common/os/NativeLibrary$1
Event: 9.581 loading class com/jogamp/common/os/NativeLibrary$1 done
Event: 9.581 loading class com/jogamp/common/os/NativeLibrary$2
Event: 9.581 loading class com/jogamp/common/os/NativeLibrary$2 done
Event: 9.581 loading class jogamp/common/os/PosixDynamicLinkerImpl
Event: 9.581 loading class jogamp/common/os/PosixDynamicLinkerImpl done
Event: 9.581 loading class jogamp/common/os/UnixDynamicLinkerImpl
Event: 9.581 loading class jogamp/common/os/UnixDynamicLinkerImpl done
Event: 9.582 loading class jogamp/common/os/DynamicLinkerImpl
Event: 9.582 loading class jogamp/common/os/DynamicLinkerImpl done

Dynamic libraries:
00400000-00411000 r-xp 00000000 08:06 4240925                            /home/marc/bin/Fiji.app/ImageJ-linux64
00610000-00611000 r--p 00010000 08:06 4240925                            /home/marc/bin/Fiji.app/ImageJ-linux64
00611000-00612000 rw-p 00011000 08:06 4240925                            /home/marc/bin/Fiji.app/ImageJ-linux64
00612000-00614000 rw-p 00000000 00:00 0 
00e56000-02d0a000 rw-p 00000000 00:00 0                                  [heap]
200000000-1f00000000 ---p 00000000 00:00 0 
7f77bc000000-7f77bc021000 rw-p 00000000 00:00 0 
7f77bc021000-7f77c0000000 ---p 00000000 00:00 0 
7f77c4000000-7f77c4021000 rw-p 00000000 00:00 0 
7f77c4021000-7f77c8000000 ---p 00000000 00:00 0 
7f77c8c9a000-7f77c8e5a000 rw-p 00000000 00:00 0 
7f77c8e5a000-7f77c8e9a000 ---p 00000000 00:00 0 
7f77c8e9a000-7f77c8ea1000 r-xp 00000000 08:05 528218                     /tmp/jogamp_0000/file_cache/jln7766078208988453423/jln8169961639362185005/libnativewindow_x11.so
7f77c8ea1000-7f77c90a0000 ---p 00007000 08:05 528218                     /tmp/jogamp_0000/file_cache/jln7766078208988453423/jln8169961639362185005/libnativewindow_x11.so
7f77c90a0000-7f77c90a1000 rw-p 00006000 08:05 528218                     /tmp/jogamp_0000/file_cache/jln7766078208988453423/jln8169961639362185005/libnativewindow_x11.so
7f77c90a1000-7f77c90a5000 r-xp 00000000 08:05 1189940                    /usr/lib/x86_64-linux-gnu/libXxf86vm.so.1.0.0
7f77c90a5000-7f77c92a5000 ---p 00004000 08:05 1189940                    /usr/lib/x86_64-linux-gnu/libXxf86vm.so.1.0.0
7f77c92a5000-7f77c92a6000 r--p 00004000 08:05 1189940                    /usr/lib/x86_64-linux-gnu/libXxf86vm.so.1.0.0
7f77c92a6000-7f77c92a7000 rw-p 00005000 08:05 1189940                    /usr/lib/x86_64-linux-gnu/libXxf86vm.so.1.0.0
7f77c92a7000-7f77c92a9000 r-xp 00000000 08:05 528217                     /tmp/jogamp_0000/file_cache/jln7766078208988453423/jln8169961639362185005/libnativewindow_awt.so
7f77c92a9000-7f77c94a8000 ---p 00002000 08:05 528217                     /tmp/jogamp_0000/file_cache/jln7766078208988453423/jln8169961639362185005/libnativewindow_awt.so
7f77c94a8000-7f77c94a9000 rw-p 00001000 08:05 528217                     /tmp/jogamp_0000/file_cache/jln7766078208988453423/jln8169961639362185005/libnativewindow_awt.so
7f77c94a9000-7f77c94aa000 r-xp 00000000 08:05 103394                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libjawt.so
7f77c94aa000-7f77c96a9000 ---p 00001000 08:05 103394                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libjawt.so
7f77c96a9000-7f77c96aa000 rw-p 00000000 08:05 103394                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libjawt.so
7f77c96aa000-7f77c96ac000 r-xp 00000000 08:05 528214                     /tmp/jogamp_0000/file_cache/jln7766078208988453423/jln8169961639362185005/libgluegen-rt.so
7f77c96ac000-7f77c98ab000 ---p 00002000 08:05 528214                     /tmp/jogamp_0000/file_cache/jln7766078208988453423/jln8169961639362185005/libgluegen-rt.so
7f77c98ab000-7f77c98ac000 rw-p 00001000 08:05 528214                     /tmp/jogamp_0000/file_cache/jln7766078208988453423/jln8169961639362185005/libgluegen-rt.so
7f77c98ac000-7f77c9a9e000 rw-p 00000000 00:00 0 
7f77c9a9e000-7f77c9aac000 ---p 00000000 00:00 0 
7f77c9aac000-7f77ca570000 r-xp 00000000 08:05 1182527                    /usr/lib/x86_64-linux-gnu/libcuda.so.346.46
7f77ca570000-7f77ca76f000 ---p 00ac4000 08:05 1182527                    /usr/lib/x86_64-linux-gnu/libcuda.so.346.46
7f77ca76f000-7f77ca921000 rw-p 00ac3000 08:05 1182527                    /usr/lib/x86_64-linux-gnu/libcuda.so.346.46
7f77ca921000-7f77ca936000 rw-p 00000000 00:00 0 
7f77ca936000-7f77cb411000 r-xp 00000000 08:05 1185944                    /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.346.46
7f77cb411000-7f77cb611000 ---p 00adb000 08:05 1185944                    /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.346.46
7f77cb611000-7f77cb7c6000 rw-p 00adb000 08:05 1185944                    /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.346.46
7f77cb7c6000-7f77cb7dc000 rw-p 00000000 00:00 0 
7f77cb7dc000-7f77cb7e1000 r-xp 00000000 08:05 1201569                    /usr/local/cuda-7.0/targets/x86_64-linux/lib/libOpenCL.so
7f77cb7e1000-7f77cb9e1000 ---p 00005000 08:05 1201569                    /usr/local/cuda-7.0/targets/x86_64-linux/lib/libOpenCL.so
7f77cb9e1000-7f77cb9e2000 rw-p 00005000 08:05 1201569                    /usr/local/cuda-7.0/targets/x86_64-linux/lib/libOpenCL.so
7f77cb9e2000-7f77cb9fd000 r-xp 00000000 08:05 527817                     /tmp/BridJExtractedLibraries5314595325653826016/libbridj.so
7f77cb9fd000-7f77cbbfc000 ---p 0001b000 08:05 527817                     /tmp/BridJExtractedLibraries5314595325653826016/libbridj.so
7f77cbbfc000-7f77cbbfd000 r--p 0001a000 08:05 527817                     /tmp/BridJExtractedLibraries5314595325653826016/libbridj.so
7f77cbbfd000-7f77cbbfe000 rw-p 0001b000 08:05 527817                     /tmp/BridJExtractedLibraries5314595325653826016/libbridj.so
7f77cbbfe000-7f77cbdf0000 rw-p 00000000 00:00 0 
7f77cbdf0000-7f77cbdfe000 ---p 00000000 00:00 0 
7f77cbdfe000-7f77cbe01000 rwxp 00000000 00:00 0 
7f77cbe01000-7f77cbeff000 rwxp 00000000 00:00 0 
7f77cbeff000-7f77cbf02000 rwxp 00000000 00:00 0 
7f77cbf02000-7f77cc000000 rwxp 00000000 00:00 0 
7f77cc000000-7f77cc021000 rw-p 00000000 00:00 0 
7f77cc021000-7f77d0000000 ---p 00000000 00:00 0 
7f77d0000000-7f77d0021000 rw-p 00000000 00:00 0 
7f77d0021000-7f77d4000000 ---p 00000000 00:00 0 
7f77d4000000-7f77d4021000 rw-p 00000000 00:00 0 
7f77d4021000-7f77d8000000 ---p 00000000 00:00 0 
7f77d8000000-7f77d8021000 rw-p 00000000 00:00 0 
7f77d8021000-7f77dc000000 ---p 00000000 00:00 0 
7f77dc000000-7f77dc021000 rw-p 00000000 00:00 0 
7f77dc021000-7f77e0000000 ---p 00000000 00:00 0 
7f77e0000000-7f77e0021000 rw-p 00000000 00:00 0 
7f77e0021000-7f77e4000000 ---p 00000000 00:00 0 
7f77e4000000-7f77e4021000 rw-p 00000000 00:00 0 
7f77e4021000-7f77e8000000 ---p 00000000 00:00 0 
7f77e8000000-7f77e8021000 rw-p 00000000 00:00 0 
7f77e8021000-7f77ec000000 ---p 00000000 00:00 0 
7f77ec000000-7f77ec021000 rw-p 00000000 00:00 0 
7f77ec021000-7f77f0000000 ---p 00000000 00:00 0 
7f77f0000000-7f77f0021000 rw-p 00000000 00:00 0 
7f77f0021000-7f77f4000000 ---p 00000000 00:00 0 
7f77f4000000-7f77f403c000 rw-p 00000000 00:00 0 
7f77f403c000-7f77f8000000 ---p 00000000 00:00 0 
7f77f8000000-7f77f8021000 rw-p 00000000 00:00 0 
7f77f8021000-7f77fc000000 ---p 00000000 00:00 0 
7f77fc000000-7f77fc021000 rw-p 00000000 00:00 0 
7f77fc021000-7f7800000000 ---p 00000000 00:00 0 
7f7800000000-7f78004d3000 rw-p 00000000 00:00 0 
7f78004d3000-7f7804000000 ---p 00000000 00:00 0 
7f7804000000-7f7804136000 rw-p 00000000 00:00 0 
7f7804136000-7f7808000000 ---p 00000000 00:00 0 
7f7808000000-7f78082f1000 rw-p 00000000 00:00 0 
7f78082f1000-7f780c000000 ---p 00000000 00:00 0 
7f780c000000-7f780c02c000 rw-p 00000000 00:00 0 
7f780c02c000-7f7810000000 ---p 00000000 00:00 0 
7f7810000000-7f7810021000 rw-p 00000000 00:00 0 
7f7810021000-7f7814000000 ---p 00000000 00:00 0 
7f7814000000-7f7814021000 rw-p 00000000 00:00 0 
7f7814021000-7f7818000000 ---p 00000000 00:00 0 
7f7818000000-7f7818021000 rw-p 00000000 00:00 0 
7f7818021000-7f781c000000 ---p 00000000 00:00 0 
7f781c023000-7f781c026000 rwxp 00000000 00:00 0 
7f781c026000-7f781c225000 rwxp 00000000 00:00 0                          [stack:7626]
7f781c225000-7f781c228000 rwxp 00000000 00:00 0 
7f781c228000-7f781c427000 rwxp 00000000 00:00 0                          [stack:7627]
7f781c427000-7f781c42a000 rwxp 00000000 00:00 0 
7f781c42a000-7f781c528000 rwxp 00000000 00:00 0 
7f781c528000-7f781c52b000 rwxp 00000000 00:00 0 
7f781c52b000-7f781c629000 rwxp 00000000 00:00 0 
7f781c629000-7f781c62c000 rwxp 00000000 00:00 0 
7f781c62c000-7f781c92c000 rwxp 00000000 00:00 0                          [stack:7628]
7f781c92c000-7f781c92f000 ---p 00000000 00:00 0 
7f781c92f000-7f781ca2d000 rwxp 00000000 00:00 0 
7f781cb2d000-7f781cd1f000 rw-p 00000000 00:00 0 
7f781cd1f000-7f781cd2d000 ---p 00000000 00:00 0 
7f781cd2d000-7f781cf1f000 rw-p 00000000 00:00 0 
7f781cf1f000-7f781cf2d000 ---p 00000000 00:00 0 
7f781cf2d000-7f781d11f000 rw-p 00000000 00:00 0 
7f781d11f000-7f781d12d000 ---p 00000000 00:00 0 
7f781d12d000-7f781d157000 r-xp 00000000 08:05 103363                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libdcpr.so
7f781d157000-7f781d357000 ---p 0002a000 08:05 103363                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libdcpr.so
7f781d357000-7f781d35a000 rw-p 0002a000 08:05 103363                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libdcpr.so
7f781d35a000-7f781d35b000 r--s 00000000 08:05 3602                       /var/cache/fontconfig/087e1975ba9a574b140bb1df193bf770-le64.cache-4
7f781d35b000-7f781d35c000 r--s 00000000 08:05 10888                      /var/cache/fontconfig/c05880de57d1f5e948fdfacc138775d9-le64.cache-4
7f781d35c000-7f781d367000 r--s 00000000 08:05 3601                       /var/cache/fontconfig/945677eb7aeaf62f1d50efc3fb3ec7d8-le64.cache-4
7f781d367000-7f781d369000 r--s 00000000 08:05 14783                      /var/cache/fontconfig/99e8ed0e538f840c565b6ed5dad60d56-le64.cache-4
7f781d369000-7f781d36f000 r--s 00000000 08:05 10884                      /var/cache/fontconfig/2cd17615ca594fa2959ae173292e504c-le64.cache-4
7f781d36f000-7f781d370000 r--s 00000000 08:05 4504                       /var/cache/fontconfig/e7071f4a29fa870f4323321c154eba04-le64.cache-4
7f781d370000-7f781d371000 r--s 00000000 08:05 14782                      /var/cache/fontconfig/0d8c3b2ac0904cb8a57a757ad11a4a08-le64.cache-4
7f781d371000-7f781d378000 r--s 00000000 08:05 4499                       /var/cache/fontconfig/a755afe4a08bf5b97852ceb7400b47bc-le64.cache-4
7f781d378000-7f781d384000 r--s 00000000 08:05 10874                      /var/cache/fontconfig/6d41288fd70b0be22e8c3a91e032eec0-le64.cache-4
7f781d384000-7f781d398000 r--s 00000000 08:05 14780                      /var/cache/fontconfig/04aabc0a78ac019cf9454389977116d2-le64.cache-4
7f781d398000-7f781d399000 r--s 00000000 08:05 14779                      /var/cache/fontconfig/1ac9eb803944fde146138c791f5cc56a-le64.cache-4
7f781d399000-7f781d39d000 r--s 00000000 08:05 3651                       /var/cache/fontconfig/385c0604a188198f04d133e54aba7fe7-le64.cache-4
7f781d39d000-7f781d39f000 r--s 00000000 08:05 14777                      /var/cache/fontconfig/767a8244fc0220cfb567a839d0392e0b-le64.cache-4
7f781d39f000-7f781d3a4000 r--s 00000000 08:05 10866                      /var/cache/fontconfig/8801497958630a81b71ace7c5f9b32a8-le64.cache-4
7f781d3a4000-7f781d3df000 r--s 00000000 08:05 10802                      /var/cache/fontconfig/365b55f210c0a22e9a19e35191240f32-le64.cache-4
7f781d3df000-7f781d3e3000 r--s 00000000 08:05 14776                      /var/cache/fontconfig/c57959a16110560c8d0fcea73374aeeb-le64.cache-4
7f781d3e3000-7f781d3ea000 r--s 00000000 08:05 14775                      /var/cache/fontconfig/3047814df9a2f067bd2d96a2b9c36e5a-le64.cache-4
7f781d3ea000-7f781d3ee000 r--s 00000000 08:05 10797                      /var/cache/fontconfig/bf3b770c553c462765856025a94f1ce6-le64.cache-4
7f781d3ee000-7f781d3f4000 r--s 00000000 08:05 3639                       /var/cache/fontconfig/b47c4e1ecd0709278f4910c18777a504-le64.cache-4
7f781d40c000-7f781d40d000 rw-p 00000000 00:00 0 
7f781d40d000-7f781d410000 ---p 00000000 00:00 0 
7f781d410000-7f781d446000 rwxp 00000000 00:00 0                          [stack:7641]
7f781d446000-7f781d447000 r--p 00000000 00:00 0 
7f781d447000-7f781d4a3000 rwxp 00000000 00:00 0 
7f781d4a3000-7f781d4aa000 r--s 00000000 08:05 1201569                    /usr/local/cuda-7.0/targets/x86_64-linux/lib/libOpenCL.so
7f781d4aa000-7f781d5ab000 rwxp 00000000 00:00 0                          [stack:7589]
7f781d5ab000-7f781d79d000 rw-p 00000000 00:00 0 
7f781d79d000-7f781d7ab000 ---p 00000000 00:00 0 
7f781d7ab000-7f781d8ac000 rwxp 00000000 00:00 0                          [stack:7617]
7f781d8ac000-7f781d915000 r-xp 00000000 08:05 103359                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libt2k.so
7f781d915000-7f781db14000 ---p 00069000 08:05 103359                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libt2k.so
7f781db14000-7f781db1b000 rw-p 00068000 08:05 103359                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libt2k.so
7f781db1b000-7f781db2b000 rw-p 00000000 00:00 0 
7f781db2b000-7f781db3c000 r-xp 00000000 08:05 103373                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libnio.so
7f781db3c000-7f781dd3b000 ---p 00011000 08:05 103373                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libnio.so
7f781dd3b000-7f781dd3c000 rw-p 00010000 08:05 103373                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libnio.so
7f781dd3c000-7f781df2e000 rw-p 00000000 00:00 0 
7f781df2e000-7f781df3c000 ---p 00000000 00:00 0 
7f781df3c000-7f781e03d000 rwxp 00000000 00:00 0                          [stack:7542]
7f781e03d000-7f781e22f000 rw-p 00000000 00:00 0 
7f781e22f000-7f781e23d000 ---p 00000000 00:00 0 
7f781e23d000-7f781e33e000 rwxp 00000000 00:00 0                          [stack:7541]
7f781e33e000-7f781e530000 rw-p 00000000 00:00 0 
7f781e530000-7f781e53e000 ---p 00000000 00:00 0 
7f781e53e000-7f781e63f000 rwxp 00000000 00:00 0                          [stack:7540]
7f781e63f000-7f781e655000 r-xp 00000000 08:05 103382                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libnet.so
7f781e655000-7f781e855000 ---p 00016000 08:05 103382                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libnet.so
7f781e855000-7f781e856000 rw-p 00016000 08:05 103382                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libnet.so
7f781e856000-7f781ea4d000 rw-p 00000000 00:00 0 
7f781ea4d000-7f781ea56000 ---p 00000000 00:00 0 
7f781ea56000-7f781ec56000 rw-p 00000000 00:00 0 
7f781ec56000-7f781ee56000 rw-p 00000000 00:00 0 
7f781ee56000-7f781f159000 rwxp 00000000 00:00 0                          [stack:7536]
7f781f159000-7f781f359000 rw-p 00000000 00:00 0 
7f781f359000-7f781f55b000 rwxp 00000000 00:00 0                          [stack:7534]
7f781f55b000-7f781f571000 r-xp 00000000 08:05 277988                     /lib/x86_64-linux-gnu/libgcc_s.so.1
7f781f571000-7f781f770000 ---p 00016000 08:05 277988                     /lib/x86_64-linux-gnu/libgcc_s.so.1
7f781f770000-7f781f771000 rw-p 00015000 08:05 277988                     /lib/x86_64-linux-gnu/libgcc_s.so.1
7f781f771000-7f781f7d6000 r-xp 00000000 08:05 103401                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libfontmanager.so
7f781f7d6000-7f781f9d5000 ---p 00065000 08:05 103401                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libfontmanager.so
7f781f9d5000-7f781f9da000 rw-p 00064000 08:05 103401                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libfontmanager.so
7f781f9da000-7f781fbea000 rw-p 00000000 00:00 0 
7f781fbea000-7f781fbf9000 r-xp 00000000 08:05 1185839                    /usr/lib/x86_64-linux-gnu/libXi.so.6.1.0
7f781fbf9000-7f781fdf8000 ---p 0000f000 08:05 1185839                    /usr/lib/x86_64-linux-gnu/libXi.so.6.1.0
7f781fdf8000-7f781fdf9000 r--p 0000e000 08:05 1185839                    /usr/lib/x86_64-linux-gnu/libXi.so.6.1.0
7f781fdf9000-7f781fdfa000 rw-p 0000f000 08:05 1185839                    /usr/lib/x86_64-linux-gnu/libXi.so.6.1.0
7f781fdfa000-7f781fdff000 r-xp 00000000 08:05 1188310                    /usr/lib/x86_64-linux-gnu/libXtst.so.6.1.0
7f781fdff000-7f781fffe000 ---p 00005000 08:05 1188310                    /usr/lib/x86_64-linux-gnu/libXtst.so.6.1.0
7f781fffe000-7f781ffff000 r--p 00004000 08:05 1188310                    /usr/lib/x86_64-linux-gnu/libXtst.so.6.1.0
7f781ffff000-7f7820000000 rw-p 00005000 08:05 1188310                    /usr/lib/x86_64-linux-gnu/libXtst.so.6.1.0
7f7820000000-7f78208c7000 rw-p 00000000 00:00 0 
7f78208c7000-7f7824000000 ---p 00000000 00:00 0 
7f7824000000-7f7824021000 rw-p 00000000 00:00 0 
7f7824021000-7f7828000000 ---p 00000000 00:00 0 
7f7828000000-7f7828fe0000 rw-p 00000000 00:00 0 
7f7828fe0000-7f782c000000 ---p 00000000 00:00 0 
7f782c000000-7f782cdd0000 rw-p 00000000 00:00 0 
7f782cdd0000-7f7830000000 ---p 00000000 00:00 0 
7f7830000000-7f7830021000 rw-p 00000000 00:00 0 
7f7830021000-7f7834000000 ---p 00000000 00:00 0 
7f7834000000-7f7834e26000 rw-p 00000000 00:00 0 
7f7834e26000-7f7838000000 ---p 00000000 00:00 0 
7f7838000000-7f7838021000 rw-p 00000000 00:00 0 
7f7838021000-7f783c000000 ---p 00000000 00:00 0 
7f783c000000-7f783c021000 rw-p 00000000 00:00 0 
7f783c021000-7f7840000000 ---p 00000000 00:00 0 
7f7840000000-7f784004b000 rw-p 00000000 00:00 0 
7f784004b000-7f7844000000 ---p 00000000 00:00 0 
7f7844000000-7f7844021000 rw-p 00000000 00:00 0 
7f7844021000-7f7848000000 ---p 00000000 00:00 0 
7f7848000000-7f7848021000 rw-p 00000000 00:00 0 
7f7848021000-7f784c000000 ---p 00000000 00:00 0 
7f784c000000-7f784c021000 rw-p 00000000 00:00 0 
7f784c021000-7f7850000000 ---p 00000000 00:00 0 
7f7850000000-7f7850021000 rw-p 00000000 00:00 0 
7f7850021000-7f7854000000 ---p 00000000 00:00 0 
7f7854000000-7f7854001000 r--s 00000000 08:05 14778                      /var/cache/fontconfig/dc05db6664285cc2f12bf69c139ae4c3-le64.cache-4
7f7854001000-7f7854002000 r--s 00000000 08:05 9482                       /var/cache/fontconfig/4794a0821666d79190d59a36cb4f44b5-le64.cache-4
7f7854002000-7f7854003000 r--s 00000000 08:05 14774                      /var/cache/fontconfig/56cf4f4769d0f4abc89a4895d7bd3ae1-le64.cache-4
7f7854003000-7f7854004000 r--s 00000000 08:05 3640                       /var/cache/fontconfig/b9d506c9ac06c20b433354fa67a72993-le64.cache-4
7f7854004000-7f7854017000 r--s 00000000 08:05 3633                       /var/cache/fontconfig/d52a8644073d54c13679302ca1180695-le64.cache-4
7f7854017000-7f7854018000 r--s 00000000 08:05 3632                       /var/cache/fontconfig/8a687c406b77f27d99abfeeba937fcce-le64.cache-4
7f7854018000-7f7854021000 r--s 00000000 08:05 6458                       /var/cache/fontconfig/3f7329c5293ffd510edef78f73874cfd-le64.cache-4
7f7854021000-7f785402c000 r--s 00000000 08:05 3629                       /var/cache/fontconfig/d589a48862398ed80a3d6066f4f56f4c-le64.cache-4
7f785402c000-7f7854036000 r--s 00000000 08:05 10781                      /var/cache/fontconfig/198d8fcf01c96d0cf813f74fd759bdb7-le64.cache-4
7f7854036000-7f7854037000 r--s 00000000 08:05 10765                      /var/cache/fontconfig/0c9eb80ebd1c36541ebe2852d3bb0c49-le64.cache-4
7f7854037000-7f7854042000 r--s 00000000 08:05 10777                      /var/cache/fontconfig/83bf95040141907cd45bb53cf7c1c148-le64.cache-4
7f7854042000-7f7854044000 r--s 00000000 08:05 3623                       /var/cache/fontconfig/6e6b34ae150a7ad95e82fb4a522f0bda-le64.cache-4
7f7854044000-7f7854045000 r--s 00000000 08:05 3622                       /var/cache/fontconfig/3334a778d104e76d188e9df399bc24d2-le64.cache-4
7f7854045000-7f7854046000 r--s 00000000 08:05 10771                      /var/cache/fontconfig/c277e94e32b20404286a1ddafa5a80f0-le64.cache-4
7f7854046000-7f7854049000 r--s 00000000 08:05 10763                      /var/cache/fontconfig/de83a0a961185c8bd1f159015d56c039-le64.cache-4
7f7854049000-7f7854061000 r--s 00000000 08:05 41343                      /var/cache/fontconfig/e13b20fdb08344e0e664864cc2ede53d-le64.cache-4
7f7854061000-7f7854065000 r--s 00000000 08:05 386                        /var/cache/fontconfig/7ef2298fde41cc6eeb7af42e48b7d293-le64.cache-4
7f7854065000-7f7854066000 r--s 00000000 08:05 9857                       /var/cache/fontconfig/e0aa53bcfa504e64f87823c16bc01eb6-le64.cache-4
7f7854066000-7f7854084000 r--s 00000000 08:05 9856                       /var/cache/fontconfig/467c019e582ee353435ea5c21d137ef6-le64.cache-4
7f7854084000-7f7854093000 r--s 00000000 08:06 3671895                    /home/marc/.cache/fontconfig/3f4bfcd84d377f43f48f2f2a365a4a37-le64.cache-4
7f7854093000-7f78540ae000 r--s 001d0000 08:05 103429                     /usr/lib/jvm/java-8-oracle/jre/lib/ext/nashorn.jar
7f78540ae000-7f78540b9000 r--s 00116000 08:05 103427                     /usr/lib/jvm/java-8-oracle/jre/lib/ext/localedata.jar
7f78540b9000-7f78540d5000 r--s 00393000 08:05 103421                     /usr/lib/jvm/java-8-oracle/jre/lib/ext/cldrdata.jar
7f78540d5000-7f7854129000 r-xp 00000000 08:05 103346                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libawt_xawt.so
7f7854129000-7f7854329000 ---p 00054000 08:05 103346                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libawt_xawt.so
7f7854329000-7f785432d000 rw-p 00054000 08:05 103346                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libawt_xawt.so
7f785432d000-7f785432e000 rw-p 00000000 00:00 0 
7f785432e000-7f78543d0000 r-xp 00000000 08:05 103356                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libawt.so
7f78543d0000-7f78545d0000 ---p 000a2000 08:05 103356                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libawt.so
7f78545d0000-7f78545dc000 rw-p 000a2000 08:05 103356                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libawt.so
7f78545dc000-7f7854800000 rw-p 00000000 00:00 0 
7f7854800000-7f7854813000 r--s 00344000 08:05 103408                     /usr/lib/jvm/java-8-oracle/jre/lib/resources.jar
7f7854813000-7f7854a13000 rw-p 00000000 00:00 0 
7f7854a13000-7f7854c13000 rw-p 00000000 00:00 0 
7f7854c13000-7f7854c15000 r--s 094d8000 08:06 4194409                    /home/marc/bin/Fiji.app/plugins/microvolution_lin_v2015.05-RC3.jar
7f7854c15000-7f7854c18000 r--s 00045000 08:06 4241001                    /home/marc/bin/Fiji.app/plugins/FlowJ_-1.29.1.jar
7f7854c18000-7f7854c19000 r--s 00005000 08:06 4240929                    /home/marc/bin/Fiji.app/plugins/3D_Objects_Counter-2.0.0.jar
7f7854c19000-7f7854c1b000 r--s 00061000 08:06 4240950                    /home/marc/bin/Fiji.app/plugins/Color_Inspector_3D-2.3.1.jar
7f7854c1b000-7f7854c1c000 r--s 00000000 08:06 4241010                    /home/marc/bin/Fiji.app/plugins/IsoData_Classifier-2.0.0.jar
7f7854c1c000-7f7854c1e000 r--s 00006000 08:06 4241098                    /home/marc/bin/Fiji.app/plugins/registration_3d-2.0.0.jar
7f7854c1e000-7f7854c20000 r--s 00009000 08:06 4241066                    /home/marc/bin/Fiji.app/plugins/Sync_Win-1.7-fiji3.jar
7f7854c20000-7f7854c22000 r--s 00008000 08:06 4241060                    /home/marc/bin/Fiji.app/plugins/Snakuscule_-2.0.0.jar
7f7854c22000-7f7854c24000 r--s 0001b000 08:06 4241087                    /home/marc/bin/Fiji.app/plugins/Volume_Viewer-2.01.1.jar
7f7854c24000-7f7854c26000 r--s 00019000 08:06 4241058                    /home/marc/bin/Fiji.app/plugins/Siox_Segmentation-1.0.4.jar
7f7854c26000-7f7854c27000 r--s 00008000 08:06 4240994                    /home/marc/bin/Fiji.app/plugins/FeatureJ_-1.6.2.jar
7f7854c27000-7f7854c2a000 r--s 00044000 08:06 5264038                    /home/marc/bin/Fiji.app/plugins/Simple_Neurite_Tracer-2.0.4.jar
7f7854c2a000-7f7854c2b000 r--s 00004000 08:06 4241000                    /home/marc/bin/Fiji.app/plugins/Fiji_Updater.jar
7f7854c2b000-7f7854c2c000 r--s 00007000 08:06 4241003                    /home/marc/bin/Fiji.app/plugins/Gray_Morphology-2.3.2.jar
7f7854c2c000-7f7854c2d000 r--s 00002000 08:06 4240947                    /home/marc/bin/Fiji.app/plugins/Clojure_Interpreter-2.0.0-SNAPSHOT.jar
7f7854c2d000-7f7854c2f000 r--s 0000e000 08:06 5264036                    /home/marc/bin/Fiji.app/plugins/Reconstruct_Reader-2.0.2.jar
7f7854c2f000-7f7854c31000 r--s 00002000 08:06 4241023                    /home/marc/bin/Fiji.app/plugins/M_I_P-2.0.0.jar
7f7854c31000-7f7854c33000 r--s 00002000 08:06 5264045                    /home/marc/bin/Fiji.app/plugins/trakem2_tps-1.1.1.jar
7f7854c33000-7f7854c43000 r--s 00133000 08:06 5900583                    /home/marc/bin/Fiji.app/plugins/SPIM_Registration-2.3.8.jar
7f7854c43000-7f7854c46000 r--s 00024000 08:06 4465913                    /home/marc/bin/Fiji.app/plugins/bigdataviewer_fiji-1.0.12.jar
7f7854c46000-7f7854c48000 r--s 00004000 08:06 4240949                    /home/marc/bin/Fiji.app/plugins/Color_Histogram-2.0.6.jar
7f7854c48000-7f7854c4d000 r--s 00063000 08:06 4724672                    /home/marc/bin/Fiji.app/plugins/Trainable_Segmentation-2.2.1.jar
7f7854c4d000-7f7854c4f000 r--s 00004000 08:06 5264044                    /home/marc/bin/Fiji.app/plugins/TrakEM2_Archipelago-2.0.1.jar
7f7854c4f000-7f7854c50000 r--s 00006000 08:06 4240938                    /home/marc/bin/Fiji.app/plugins/Arrow_-2.0.1.jar
7f7854c50000-7f7854c52000 r--s 00007000 08:06 4241054                    /home/marc/bin/Fiji.app/plugins/Series_Labeler-2.0.0.jar
7f7854c52000-7f7854c53000 r--s 00004000 08:06 4240954                    /home/marc/bin/Fiji.app/plugins/Dichromacy_-2.1.0.jar
7f7854c53000-7f7854c55000 r--s 00006000 08:06 4241036                    /home/marc/bin/Fiji.app/plugins/RandomJ_-1.5.2.jar
7f7854c55000-7f7854c56000 r--s 00001000 08:06 4240945                    /home/marc/bin/Fiji.app/plugins/Calculator_Plus-2.0.0.jar
7f7854c56000-7f7854c58000 r--s 0000e000 08:06 4240940                    /home/marc/bin/Fiji.app/plugins/BalloonSegmentation_-2.0.0.jar
7f7854c58000-7f7854c59000 r--s 00006000 08:06 4241084                    /home/marc/bin/Fiji.app/plugins/Video_Editing-2.0.0.jar
7f7854c59000-7f7854c5b000 r--s 00023000 08:06 3670474                    /home/marc/bin/Fiji.app/plugins/metroloj_.jar
7f7854c5b000-7f7854c5e000 r--s 00045000 08:06 3673142                    /home/marc/bin/Fiji.app/plugins/Align3_TP.jar
7f7854c5e000-7f7854c60000 r--s 00001000 08:06 4240935                    /home/marc/bin/Fiji.app/plugins/Analyze_Reader_Writer-2.0.0.jar
7f7854c60000-7f7854c62000 r--s 00009000 08:06 4241061                    /home/marc/bin/Fiji.app/plugins/SplineDeformationGenerator_-2.0.0.jar
7f7854c62000-7f7854c63000 r--s 00000000 08:06 4241041                    /home/marc/bin/Fiji.app/plugins/Samples_-2.0.0.jar
7f7854c63000-7f7854c65000 r--s 00006000 08:06 4241086                    /home/marc/bin/Fiji.app/plugins/Volume_Calculator-1.0.1.jar
7f7854c65000-7f7854c66000 r--s 0000a000 08:06 4240997                    /home/marc/bin/Fiji.app/plugins/Fiji_Developer-2.0.3.jar
7f7854c66000-7f7854c68000 r--s 00001000 08:06 4241072                    /home/marc/bin/Fiji.app/plugins/TopoJ_-2.0.0.jar
7f7854c68000-7f7854c69000 r--s 00004000 08:06 4241082                    /home/marc/bin/Fiji.app/plugins/Vaa3d_Reader-2.0.1.jar
7f7854c69000-7f7854c6b000 r--s 00005000 08:06 4241033                    /home/marc/bin/Fiji.app/plugins/PointPicker_-2.0.0.jar
7f7854c6b000-7f7854c6d000 r--s 00000000 08:06 4240941                    /home/marc/bin/Fiji.app/plugins/BeanShell_Interpreter-2.0.0-SNAPSHOT.jar
7f7854c6d000-7f7854c6f000 r--s 0000e000 08:06 4241092                    /home/marc/bin/Fiji.app/plugins/ij-ImageIO_.jar
7f7854c6f000-7f7854c70000 r--s 00010000 08:06 4241056                    /home/marc/bin/Fiji.app/plugins/Sholl_Analysis-3.4.4.jar
7f7854c70000-7f7854c72000 r--s 00012000 08:06 4241008                    /home/marc/bin/Fiji.app/plugins/Image_Expression_Parser-3.0.0.jar
7f7854c72000-7f7854c73000 r--s 00005000 08:06 4240956                    /home/marc/bin/Fiji.app/plugins/Directionality_-2.0.1.jar
7f7854c73000-7f7854c74000 r--s 00002000 08:06 4241038                    /home/marc/bin/Fiji.app/plugins/Refresh_Javas-2.0.0-SNAPSHOT.jar
7f7854c74000-7f7854c79000 r--s 00038000 08:06 5264046                    /home/marc/bin/Fiji.app/plugins/z_spacing-0.0.1-SNAPSHOT.jar
7f7854c79000-7f7854c7b000 r--s 00004000 08:06 5264043                    /home/marc/bin/Fiji.app/plugins/FS_Align_TrakEM2-2.0.1.jar
7f7854c7b000-7f7854c7c000 r--s 00008000 08:06 4240943                    /home/marc/bin/Fiji.app/plugins/CLI_-2.0.0-SNAPSHOT.jar
7f7854c7c000-7f7854c7d000 r--s 00004000 08:06 4241016                    /home/marc/bin/Fiji.app/plugins/LSM_Reader-4.1.1.jar
7f7854c7d000-7f7854c82000 r--s 0004d000 08:06 4241017                    /home/marc/bin/Fiji.app/plugins/LSM_Toolbox-4.1.1.jar
7f7854c82000-7f7854c83000 r--s 00004000 08:06 4240995                    /home/marc/bin/Fiji.app/plugins/Feature_Detection-2.0.1.jar
7f7854c83000-7f7854c86000 r--s 0001e000 08:06 4240948                    /home/marc/bin/Fiji.app/plugins/Colocalisation_Analysis-2.0.2.jar
7f7854c86000-7f7854c87000 r--s 00002000 08:06 4240936                    /home/marc/bin/Fiji.app/plugins/Anisotropic_Diffusion_2D-2.0.0.jar
7f7854c87000-7f7854c88000 r--s 00006000 08:06 4240937                    /home/marc/bin/Fiji.app/plugins/Archipelago_Plugins-0.5.2.jar
7f7854c88000-7f7854c89000 r--s 00001000 08:06 4241070                    /home/marc/bin/Fiji.app/plugins/Time_Stamper-2.0.0.jar
7f7854c89000-7f7854c8a000 r--s 0000c000 08:06 4463459                    /home/marc/bin/Fiji.app/plugins/TransformJ_-3.1.0.jar
7f7854c8a000-7f7854c8c000 r--s 0002a000 08:06 5264034                    /home/marc/bin/Fiji.app/plugins/IO_-2.2.1.jar
7f7854c8c000-7f7854c91000 r--s 00028000 08:06 4240996                    /home/marc/bin/Fiji.app/plugins/Fiji_Archipelago-2.0.0.jar
7f7854c91000-7f7854c93000 r--s 00015000 08:06 4241078                    /home/marc/bin/Fiji.app/plugins/TurboReg_-2.0.0.jar
7f7854c93000-7f7854c95000 r--s 00004000 08:06 4241032                    /home/marc/bin/Fiji.app/plugins/PIV_analyser-1.1.1.jar
7f7854c95000-7f7854c97000 r--s 00011000 08:06 5264032                    /home/marc/bin/Fiji.app/plugins/Descriptor_based_registration-2.0.11.jar
7f7854c97000-7f7854c98000 r--s 00001000 08:06 4241014                    /home/marc/bin/Fiji.app/plugins/Jython_Interpreter-2.0.0-SNAPSHOT.jar
7f7854c98000-7f7854c99000 r--s 0000f000 08:06 4241030                    /home/marc/bin/Fiji.app/plugins/MosaicJ_-2.0.0.jar
7f7854c99000-7f7854c9a000 r--s 00000000 08:06 4241067                    /home/marc/bin/Fiji.app/plugins/Thread_Killer-2.0.0.jar
7f7854c9a000-7f7854c9b000 r--s 00002000 08:06 4240951                    /home/marc/bin/Fiji.app/plugins/Colour_Deconvolution-2.0.0.jar
7f7854c9b000-7f7854c9c000 r--s 00003000 08:06 4240952                    /home/marc/bin/Fiji.app/plugins/CorrectBleach_-2.0.1.jar
7f7854c9c000-7f7854c9e000 r--s 00026000 08:06 4241085                    /home/marc/bin/Fiji.app/plugins/View5D_-1.3.1.jar
7f7854c9e000-7f7854c9f000 r--s 00005000 08:06 4240939                    /home/marc/bin/Fiji.app/plugins/Auto_Threshold-1.16.0.jar
7f7854c9f000-7f7854ca0000 r--s 00003000 08:06 5264030                    /home/marc/bin/Fiji.app/plugins/blockmatching_-2.1.1.jar
7f7854ca0000-7f7854ca2000 r--s 00001000 08:06 4241083                    /home/marc/bin/Fiji.app/plugins/Vaa3d_Writer-1.0.0.jar
7f7854ca2000-7f7854ca3000 r--s 0000d000 08:06 4241034                    /home/marc/bin/Fiji.app/plugins/QuickPALM_-1.1.1.jar
7f7854ca3000-7f7854ca4000 r--s 00008000 08:06 4241063                    /home/marc/bin/Fiji.app/plugins/Stack_Manipulation-2.0.1.jar
7f7854ca4000-7f7854ca5000 r--s 00005000 08:06 5264031                    /home/marc/bin/Fiji.app/plugins/Bug_Submitter-2.0.2.jar
7f7854ca5000-7f7854ca6000 r--s 00002000 08:06 4240955                    /home/marc/bin/Fiji.app/plugins/Differentials_-2.0.0.jar
7f7854ca6000-7f7854ca8000 r--s 00008000 08:06 4241039                    /home/marc/bin/Fiji.app/plugins/SPIM_Opener-2.0.1.jar
7f7854ca8000-7f7854ca9000 r--s 00001000 08:06 4241055                    /home/marc/bin/Fiji.app/plugins/SheppLogan_-2.0.0.jar
7f7854ca9000-7f7854cab000 r--s 0001c000 08:06 4241007                    /home/marc/bin/Fiji.app/plugins/Image_5D-1.2.6.jar
7f7854cab000-7f7854cac000 r--s 00005000 08:06 4241029                    /home/marc/bin/Fiji.app/plugins/Manual_Tracking-2.1.0.jar
7f7854cac000-7f7854cad000 r--s 00001000 08:06 4241004                    /home/marc/bin/Fiji.app/plugins/Helmholtz_Analysis-2.0.1.jar
7f7854cad000-7f7854cae000 r--s 00001000 08:06 4241013                    /home/marc/bin/Fiji.app/plugins/Javascript_-2.0.0-SNAPSHOT.jar
7f7854cae000-7f7854cb0000 r--s 00014000 08:06 4241009                    /home/marc/bin/Fiji.app/plugins/Interactive_3D_Surface_Plot-2.31.1.jar
7f7854cb0000-7f7854cb1000 r--s 00001000 08:06 4241064                    /home/marc/bin/Fiji.app/plugins/Statistical_Region_Merging-2.0.0.jar
7f7854cb1000-7f7854cb3000 r--s 00004000 08:06 4241020                    /home/marc/bin/Fiji.app/plugins/LocalThickness_-3.1.1.jar
7f7854cb3000-7f7854cb5000 r--s 00017000 08:06 4241079                    /home/marc/bin/Fiji.app/plugins/UnwarpJ_-2.0.0.jar
7f7854cb5000-7f7854cb6000 r--s 00001000 08:06 4241015                    /home/marc/bin/Fiji.app/plugins/Kuwahara_Filter-2.0.0.jar
7f7854cb6000-7f7854cb7000 r--s 00003000 08:06 4241031                    /home/marc/bin/Fiji.app/plugins/Multi_Kymograph-2.0.0.jar
7f7854cb7000-7f7854cb8000 r--s 00019000 08:06 4241022                    /home/marc/bin/Fiji.app/plugins/MTrackJ_-1.5.2.jar
7f7854cb8000-7f7854cba000 r--s 0001b000 08:06 4240992                    /home/marc/bin/Fiji.app/plugins/Extended_Depth_Field-2.0.1.jar
7f7854cba000-7f7854cbc000 r--s 00008000 08:06 5264033                    /home/marc/bin/Fiji.app/plugins/Graph_Cut-1.0.1.jar
7f7854cbc000-7f7854cbd000 r--s 00005000 08:06 4240998                    /home/marc/bin/Fiji.app/plugins/Fiji_Package_Maker-2.1.0.jar
7f7854cbd000-7f7854cbe000 r--s 00002000 08:06 4241035                    /home/marc/bin/Fiji.app/plugins/RATS_-2.0.0.jar
7f7854cbe000-7f7854cc1000 r--s 00039000 08:06 5506248                    /home/marc/bin/Fiji.app/plugins/bio-formats_plugins-5.1.2.jar
7f7854cc1000-7f7854cc2000 r--s 00002000 08:06 4241021                    /home/marc/bin/Fiji.app/plugins/MTrack2_-2.0.0.jar
7f7854cc2000-7f7854cc4000 r--s 0000e000 08:06 4241069                    /home/marc/bin/Fiji.app/plugins/Time_Lapse-2.0.1.jar
7f7854cc4000-7f7854cc5000 r--s 00002000 08:06 4240928                    /home/marc/bin/Fiji.app/plugins/3D_Blob_Segmentation-2.0.2.jar
7f7854cc5000-7f7854cc8000 r--s 00054000 08:06 5264040                    /home/marc/bin/Fiji.app/plugins/Stitching_-3.0.2.jar
7f7854cc8000-7f7854cca000 r--s 00012000 08:06 4241093                    /home/marc/bin/Fiji.app/plugins/level_sets-1.0.1.jar
7f7854cca000-7f7854ccc000 r--s 00015000 08:06 4240999                    /home/marc/bin/Fiji.app/plugins/Fiji_Plugins-3.0.0.jar
7f7854ccc000-7f7854ccd000 r--s 00005000 08:06 4241018                    /home/marc/bin/Fiji.app/plugins/Lasso_and_Blow_Tool-2.0.1.jar
7f7854ccd000-7f7854cce000 r--s 00002000 08:06 4241059                    /home/marc/bin/Fiji.app/plugins/Skeletonize3D_-1.0.1.jar
7f7854cce000-7f7854ccf000 r--s 00008000 08:06 4240934                    /home/marc/bin/Fiji.app/plugins/AnalyzeSkeleton_-2.0.4.jar
7f7854ccf000-7f7854cd1000 r--s 0001f000 08:06 5264035                    /home/marc/bin/Fiji.app/plugins/mpicbg_-1.0.1.jar
7f7854cd1000-7f7854ce8000 r--s 00204000 08:06 5264042                    /home/marc/bin/Fiji.app/plugins/TrakEM2_-1.0f.jar
7f7854ce8000-7f7854cea000 r--s 0002d000 08:06 4241088                    /home/marc/bin/Fiji.app/plugins/bUnwarpJ_-2.6.2.jar
7f7854cea000-7f7854ceb000 r--s 00009000 08:06 4465909                    /home/marc/bin/Fiji.app/plugins/register_virtual_stack_slices-2.0.5.jar
7f7854ceb000-7f7854cec000 r--s 00001000 08:06 4241019                    /home/marc/bin/Fiji.app/plugins/Linear_Kuwahara-2.0.0.jar
7f7854cec000-7f7854ced000 r--s 00001000 08:06 4240944                    /home/marc/bin/Fiji.app/plugins/CPU_Meter-2.0.0.jar
7f7854ced000-7f7854cf3000 r--s 00063000 08:06 4596762                    /home/marc/bin/Fiji.app/plugins/VIB_-2.0.3.jar
7f7854cf3000-7f7854cf4000 r--s 00006000 08:06 4240946                    /home/marc/bin/Fiji.app/plugins/Cell_Counter-2.0.0.jar
7f7854cf4000-7f7854cf5000 r--s 00005000 08:06 4241071                    /home/marc/bin/Fiji.app/plugins/ToAST_-25.0.1.jar
7f7854cf5000-7f7854cf7000 r--s 00007000 08:06 5115848                    /home/marc/bin/Fiji.app/plugins/panorama_-3.0.0.jar
7f7854cf7000-7f7854cf8000 r--s 00002000 08:06 4240931                    /home/marc/bin/Fiji.app/plugins/Algorithm_Launcher.jar
7f7854cf8000-7f7854cf9000 r--s 00001000 08:06 4241012                    /home/marc/bin/Fiji.app/plugins/JRuby_Interpreter-2.0.0-SNAPSHOT.jar
7f7854cf9000-7f7854cfa000 r--s 00001000 08:06 4241005                    /home/marc/bin/Fiji.app/plugins/IJ_Robot-2.0.0.jar
7f7854cfa000-7f7854cfb000 r--s 00004000 08:06 4241062                    /home/marc/bin/Fiji.app/plugins/StackReg_-2.0.0.jar
7f7854cfb000-7f7854d02000 r--s 00080000 08:06 4240930                    /home/marc/bin/Fiji.app/plugins/3D_Viewer-3.0.1.jar
7f7854d02000-7f7854d15000 r--s 00128000 08:06 5115856                    /home/marc/bin/Fiji.app/plugins/TrackMate_-2.7.3.jar
7f7854d15000-7f7854d9e000 r--s 0071a000 08:06 4241322                    /home/marc/bin/Fiji.app/jars/batik.jar
7f7854d9e000-7f7854da0000 r--s 00003000 08:06 4241239                    /home/marc/bin/Fiji.app/jars/scifio-lifesci-0.7.0.jar
7f7854da0000-7f7854da9000 r--s 00064000 08:06 4465912                    /home/marc/bin/Fiji.app/jars/bigdataviewer-core-1.1.4.jar
7f7854da9000-7f7854dab000 r--s 00002000 08:06 4241219                    /home/marc/bin/Fiji.app/jars/mij-1.3.6-fiji2.jar
7f7854dab000-7f7854dac000 r--s 00005000 08:06 4241241                    /home/marc/bin/Fiji.app/jars/scifio-tools-0.14.0.jar
7f7854dac000-7f7854db4000 r--s 00063000 08:06 4241106                    /home/marc/bin/Fiji.app/jars/ant-nodeps.jar
7f7854db4000-7f7854dba000 r--s 00043000 08:06 4241181                    /home/marc/bin/Fiji.app/jars/jdom-2.0.2.jar
7f7854dba000-7f7854dbd000 r--s 00023000 08:06 4984972                    /home/marc/bin/Fiji.app/jars/imglib2-algorithm-gpl-0.1.3.jar
7f7854dbd000-7f7854dbe000 r--s 00002000 08:06 5119813                    /home/marc/bin/Fiji.app/jars/jitk-tps-1.1.1.jar
7f7854dbe000-7f7854dc0000 r--s 0001a000 08:06 5119801                    /home/marc/bin/Fiji.app/jars/scifio-ome-xml-0.13.0.jar
7f7854dc0000-7f7854dc2000 r--s 0000f000 08:06 5119800                    /home/marc/bin/Fiji.app/jars/scifio-bf-compat-2.0.0.jar
7f7854dc2000-7f7854dc9000 r--s 000b2000 08:06 4241207                    /home/marc/bin/Fiji.app/jars/js.jar
7f7854dc9000-7f7854dcb000 r--s 0000b000 08:06 5119805                    /home/marc/bin/Fiji.app/jars/mpicbg-trakem2-1.2.2.jar
7f7854dcb000-7f7854dd3000 r--s 00028000 08:06 4194412                    /home/marc/bin/Fiji.app/jars/xml-apis-1.3.03.jar
7f7854dd3000-7f7854de4000 r--s 000c0000 08:06 5119799                    /home/marc/bin/Fiji.app/jars/legacy-imglib1-1.1.4-DEPRECATED.jar
7f7854de4000-7f7854de8000 r--s 000e4000 08:06 4241194                    /home/marc/bin/Fiji.app/jars/jna.jar
7f7854de8000-7f7854deb000 r--s 0000d000 08:06 4984969                    /home/marc/bin/Fiji.app/jars/imglib2-ui-2.0.0-beta-29.jar
7f7854deb000-7f7854ded000 r--s 00030000 08:06 4241159                    /home/marc/bin/Fiji.app/jars/imageware-2.0.0.jar
7f7854ded000-7f7854df2000 r--s 0004c000 08:06 4985633                    /home/marc/bin/Fiji.app/jars/mpicbg-1.0.1.jar
7f7854df2000-7f7854e01000 r--s 0017d000 08:06 4241170                    /home/marc/bin/Fiji.app/jars/itextpdf-5.1.1.jar
7f7854e01000-7f7854e03000 r--s 0000e000 08:06 4724694                    /home/marc/bin/Fiji.app/jars/opencl4java-1.0.0-RC4.jar
7f7854e03000-7f7854e12000 r--s 0010c000 08:06 4724690                    /home/marc/bin/Fiji.app/jars/javacl-1.0.0-RC4.jar
7f7854e12000-7f7854e21000 r--s 000e1000 08:06 4461639                    /home/marc/bin/Fiji.app/jars/dx-1.7.jar
7f7854e21000-7f7854e25000 r--s 0002e000 08:06 4463458                    /home/marc/bin/Fiji.app/jars/miglayout-3.7.4.jar
7f7854e25000-7f7854e29000 r--s 0002a000 08:06 4461637                    /home/marc/bin/Fiji.app/jars/commons-io-2.4.jar
7f7854e29000-7f7854e60000 r--s 00aab000 08:06 4463726                    /home/marc/bin/Fiji.app/jars/imglib-clearvolume-1.0.0.jar
7f7854e60000-7f7854e61000 r--s 00002000 08:06 4241105                    /home/marc/bin/Fiji.app/jars/ant-launcher.jar
7f7854e61000-7f7854ec0000 r--s 00baa000 08:06 4241261                    /home/marc/bin/Fiji.app/jars/tools-1.4.2.jar
7f7854ec0000-7f7854ed0000 r--s 00119000 08:06 4241176                    /home/marc/bin/Fiji.app/jars/javac-1.6.0.24-ubuntu-fiji2.jar
7f7854ed0000-7f7854ee7000 r--s 00112000 08:06 5119818                    /home/marc/bin/Fiji.app/jars/xercesImpl-2.8.1.jar
7f7854ee7000-7f7854eed000 r--s 0004d000 08:06 5119814                    /home/marc/bin/Fiji.app/jars/kryo-2.24.0.jar
7f7854eed000-7f7854ef3000 r--s 0004f000 08:06 5119812                    /home/marc/bin/Fiji.app/jars/ejml-0.24.jar
7f7854ef3000-7f7854ef5000 r--s 00001000 08:06 4597865                    /home/marc/bin/Fiji.app/jars/scripting-jython-0.2.1.jar
7f7854ef5000-7f7854ef7000 r--s 00001000 08:06 4597705                    /home/marc/bin/Fiji.app/jars/imagej-2.0.0-rc-30.jar
7f7854ef7000-7f7854f1b000 r--s 001cd000 08:06 4241135                    /home/marc/bin/Fiji.app/jars/commons-math3-3.4.1.jar
7f7854f1b000-7f7854f24000 r--s 000dc000 08:06 4724684                    /home/marc/bin/Fiji.app/jars/bridj-0.7.0.jar
7f7854f24000-7f7854f25000 r--s 00003000 08:06 4724693                    /home/marc/bin/Fiji.app/jars/nativelibs4java-utils-1.6.jar
7f7854f25000-7f7854f2c000 r--s 00052000 08:06 4597853                    /home/marc/bin/Fiji.app/jars/imagej-plugins-commands-0.5.1.jar
7f7854f2c000-7f7854f31000 r--s 00070000 08:06 4241171                    /home/marc/bin/Fiji.app/jars/jacl.jar
7f7854f31000-7f7854f33000 r--s 0000f000 08:06 4241114                    /home/marc/bin/Fiji.app/jars/autocomplete.jar
7f7854f33000-7f7854f41000 r--s 0007f000 08:06 4461636                    /home/marc/bin/Fiji.app/jars/commons-collections-3.2.1.jar
7f7854f41000-7f7854f43000 r--s 00004000 08:06 5119787                    /home/marc/bin/Fiji.app/jars/scijava-plugins-commands-0.2.0.jar
7f7854f43000-7f7854f45000 r--s 00007000 08:06 4984963                    /home/marc/bin/Fiji.app/jars/imglib2-ij-2.0.0-beta-30.jar
7f7854f45000-7f7854f4e000 r--s 001d3000 08:06 4597704                    /home/marc/bin/Fiji.app/jars/ij-1.49s.jar
7f7854f4e000-7f7854f52000 r--s 0003e000 08:06 4597706                    /home/marc/bin/Fiji.app/jars/imagej-legacy-0.15.0.jar
7f7854f52000-7f7854f56000 r--s 00036000 08:06 4985565                    /home/marc/lib/javacpp-0.11.jar
7f7854f56000-7f7854f5d000 r--s 00035000 08:06 4241190                    /home/marc/bin/Fiji.app/jars/jgrapht-0.8.3.jar
7f7854f5d000-7f7854f61000 r--s 00030000 08:06 5119810                    /home/marc/bin/Fiji.app/jars/metadata-extractor-2.6.2.jar
7f7854f61000-7f7854f66000 r--s 00030000 08:06 4724691                    /home/marc/bin/Fiji.app/jars/javacl-core-1.0.0-RC4.jar
7f7854f66000-7f7854f69000 r--s 00024000 08:06 5119784                    /home/marc/bin/Fiji.app/jars/ij1-patcher-0.12.1.jar
7f7854f69000-7f7854f6f000 r--s 00044000 08:06 4241183                    /home/marc/bin/Fiji.app/jars/jdom2-2.0.5.jar
7f7854f6f000-7f7854f72000 r--s 00014000 08:06 5119804                    /home/marc/bin/Fiji.app/jars/spim_data-1.0.0-beta-7.jar
7f7854f72000-7f7854f84000 r--s 000b8000 08:06 4463457                    /home/marc/bin/Fiji.app/jars/log4j-core-2.1.jar
7f7854f84000-7f7854f86000 r--s 0000d000 08:06 4241134                    /home/marc/bin/Fiji.app/jars/commons-logging-1.1.1.jar
7f7854f86000-7f7854f88000 r--s 00014000 08:06 4241137                    /home/marc/bin/Fiji.app/jars/fake-2.0.0-SNAPSHOT.jar
7f7854f88000-7f7854f89000 r--s 00007000 08:06 4241140                    /home/marc/bin/Fiji.app/jars/fiji-scripting-2.0.0-SNAPSHOT.jar
7f7854f89000-7f7854f8a000 r--s 00002000 08:06 4241264                    /home/marc/bin/Fiji.app/jars/weave_jy2java-2.0.0-SNAPSHOT.jar
7f7854f8a000-7f7854f8d000 r--s 00010000 08:06 4241108                    /home/marc/bin/Fiji.app/jars/args4j-2.0.25.jar
7f7854f8d000-7f7854f8f000 r--s 00005000 08:06 5119802                    /home/marc/bin/Fiji.app/jars/scifio-cli-0.3.2.jar
7f7854f8f000-7f7854f91000 r--s 00009000 08:06 5119816                    /home/marc/bin/Fiji.app/jars/objenesis-2.1.jar
7f7854f91000-7f7854f92000 r--s 00001000 08:06 4241255                    /home/marc/bin/Fiji.app/jars/scripting-jruby-0.2.0.jar
7f7854f92000-7f7854f93000 r--s 00001000 08:06 4241254                    /home/marc/bin/Fiji.app/jars/scripting-javascript-0.3.0.jar
7f7854f93000-7f7854f94000 r--s 00002000 08:06 4241250                    /home/marc/bin/Fiji.app/jars/scripting-beanshell-0.2.0.jar
7f7854f94000-7f7854f96000 r--s 0000b000 08:06 4241152                    /home/marc/bin/Fiji.app/jars/imagej-plugins-tools-0.3.0.jar
7f7854f96000-7f7854f98000 r--s 0001b000 08:06 4241138                    /home/marc/bin/Fiji.app/jars/fiji-compat-2.0.2.jar
7f7854f98000-7f7854f9d000 r--s 00094000 08:05 103534                     /usr/lib/jvm/java-8-oracle/jre/lib/jsse.jar
7f7854f9d000-7f7854fa8000 r--s 0015c000 08:06 4241204                    /home/marc/bin/Fiji.app/jars/jpedalSTD-2.80b11.jar
7f7854fa8000-7f7854fab000 r--s 0001e000 08:06 4463456                    /home/marc/bin/Fiji.app/jars/log4j-api-2.1.jar
7f7854fab000-7f7854fde000 r--s 0042e000 08:06 4241226                    /home/marc/bin/Fiji.app/jars/netcdf-4.3.19.jar
7f7854fde000-7f7854fe3000 r--s 00018000 08:06 4241099                    /home/marc/bin/Fiji.app/jars/JWlz-1.4.0.jar
7f7854fe3000-7f785500e000 r--s 001f9000 08:06 5119809                    /home/marc/bin/Fiji.app/jars/guava-17.0.jar
7f785500e000-7f7855013000 r--s 00041000 08:06 4461638                    /home/marc/bin/Fiji.app/jars/commons-lang-2.6.jar
7f7855013000-7f7855022000 r--s 00265000 08:06 4198712                    /home/marc/bin/Fiji.app/jars/jcuda-maven-6.5.jar
7f7855022000-7f7855024000 r--s 00006000 08:06 5119808                    /home/marc/bin/Fiji.app/jars/scifio-hdf5-0.1.1.jar
7f7855024000-7f7855044000 r--s 0094e000 08:06 4241192                    /home/marc/bin/Fiji.app/jars/jhdf5-14.12.0.jar
7f7855044000-7f785504b000 r--s 0003a000 08:06 5119811                    /home/marc/bin/Fiji.app/jars/commons-codec-1.8.jar
7f785504b000-7f785504f000 r--s 00038000 08:06 4465907                    /home/marc/bin/Fiji.app/jars/imagej-updater-0.7.5.jar
7f785504f000-7f7855052000 r--s 0001c000 08:06 4597678                    /home/marc/bin/Fiji.app/jars/scijava-ui-swing-0.6.1.jar
7f7855052000-7f7855054000 r--s 0001b000 08:06 5119819                    /home/marc/bin/Fiji.app/jars/xmpcore-5.1.2.jar
7f7855054000-7f7855056000 r--s 0000b000 08:06 4241230                    /home/marc/bin/Fiji.app/jars/pentaho-package-manager-1.0.8.jar
7f7855056000-7f7855058000 r--s 00016000 08:06 4241175                    /home/marc/bin/Fiji.app/jars/java-cup-0.11a.jar
7f7855058000-7f78550a2000 r--s 006b0000 08:06 4241265                    /home/marc/bin/Fiji.app/jars/weka-dev-3.7.11.jar
7f78550a2000-7f78550a3000 r--s 00149000 08:06 5119806                    /home/marc/bin/Fiji.app/jars/T2-NIT-1.1.0.jar
7f78550a3000-7f78550a5000 r--s 00000000 08:06 5119815                    /home/marc/bin/Fiji.app/jars/minlog-1.2.jar
7f78550a5000-7f78550a8000 r--s 00015000 08:06 4241104                    /home/marc/bin/Fiji.app/jars/ant-junit.jar
7f78550a8000-7f78550a9000 r--s 00005000 08:06 4241263                    /home/marc/bin/Fiji.app/jars/wavelets-2.0.0.jar
7f78550a9000-7f78550bd000 r--s 00131000 08:06 4241107                    /home/marc/bin/Fiji.app/jars/ant.jar
7f78550bd000-7f78550bf000 r--s 0000c000 08:06 4241182                    /home/marc/bin/Fiji.app/jars/jdom-contrib.jar
7f78550bf000-7f78550ca000 r--s 000bb000 08:06 4241191                    /home/marc/bin/Fiji.app/jars/jgraphx-1.10.4.1.jar
7f78550ca000-7f78550cf000 r--s 0002a000 08:06 4241143                    /home/marc/bin/Fiji.app/jars/gson-2.2.4.jar
7f78550cf000-7f78550d0000 r--s 00002000 08:06 4241155                    /home/marc/bin/Fiji.app/jars/imagej-ui-awt-0.3.0.jar
7f78550d0000-7f78550e1000 r--s 0016e000 08:06 4241187                    /home/marc/bin/Fiji.app/jars/jfreechart-1.0.19.jar
7f78550e1000-7f78550e2000 r--s 00005000 08:06 5119755                    /home/marc/bin/Fiji.app/jars/scripting-java-0.3.1.jar
7f78550e2000-7f78550e4000 r--s 0000a000 08:06 4241248                    /home/marc/bin/Fiji.app/jars/scijava-ui-awt-0.1.3.jar
7f78550e4000-7f78550ed000 r--s 000ae000 08:06 4463429                    /home/marc/bin/Fiji.app/jars/javassist-3.19.0-GA.jar
7f78550ed000-7f78550f5000 r--s 00054000 08:06 4984952                    /home/marc/bin/Fiji.app/jars/imglib2-algorithm-0.2.1.jar
7f78550f5000-7f7855113000 r--s 00102000 08:06 4597673                    /home/marc/bin/Fiji.app/jars/imagej-ops-0.12.0.jar
7f7855113000-7f785511a000 r--s 00064000 08:06 4597674                    /home/marc/bin/Fiji.app/jars/imagej-ui-swing-0.11.2.jar
7f785511a000-7f7855129000 r--s 0007f000 08:06 4241202                    /home/marc/bin/Fiji.app/jars/joda-time-2.3.jar
7f7855129000-7f7855151000 r--s 00241000 08:06 4984954                    /home/marc/bin/Fiji.app/jars/trove4j-3.0.3.jar
7f7855151000-7f78551f5000 r--s 00d39000 08:06 4241209                    /home/marc/bin/Fiji.app/jars/jython-shaded-2.5.3.jar
7f78551f5000-7f7855233000 r--s 00a05000 08:06 4241206                    /home/marc/bin/Fiji.app/jars/jruby-stdlib-1.7.12.jar
7f7855233000-7f7875861000 rw-p 00000000 00:00 0 
7f7875861000-7f787980c000 ---p 00000000 00:00 0 
7f787980c000-7f787988a000 rw-p 00000000 00:00 0 
7f787988a000-7f7879958000 ---p 00000000 00:00 0 
7f7879958000-7f7879a55000 rw-p 00000000 00:00 0 
7f7879a55000-7f787d9ff000 ---p 00000000 00:00 0 
7f787d9ff000-7f788d550000 rw-p 00000000 00:00 0 
7f788d550000-7f78a7390000 ---p 00000000 00:00 0 
7f78a7390000-7f78c6a40000 rw-p 00000000 00:00 0 
7f78c6a40000-7f80bc000000 ---p 00000000 00:00 0 
7f80bc000000-7f80bc021000 rw-p 00000000 00:00 0 
7f80bc021000-7f80c0000000 ---p 00000000 00:00 0 
7f80c0000000-7f80c0002000 r--s 0000e000 08:06 4984949                    /home/marc/bin/Fiji.app/jars/imglib2-realtransform-2.0.0-beta-29.jar
7f80c0002000-7f80c0003000 r--s 00004000 08:06 4984971                    /home/marc/bin/Fiji.app/jars/imglib2-algorithm-fft-0.1.2.jar
7f80c0003000-7f80c0004000 r--s 00001000 08:06 4984970                    /home/marc/bin/Fiji.app/jars/scijava-config-2.0.0.jar
7f80c0004000-7f80c0006000 r--s 00001000 08:06 4241245                    /home/marc/bin/Fiji.app/jars/scijava-plugins-platforms-0.1.3.jar
7f80c0006000-7f80c0008000 r--s 00003000 08:06 5119783                    /home/marc/bin/Fiji.app/jars/native-lib-loader-2.0.3.jar
7f80c0008000-7f80c0015000 r--s 00092000 08:06 4597672                    /home/marc/bin/Fiji.app/jars/scijava-common-2.41.0.jar
7f80c0015000-7f80c0018000 r--s 0001b000 08:06 4984951                    /home/marc/bin/Fiji.app/jars/imglib2-roi-0.3.0.jar
7f80c0018000-7f80c0022000 r--s 0006d000 08:06 5119750                    /home/marc/bin/Fiji.app/jars/imagej-common-0.14.0.jar
7f80c0022000-7f80c002d000 r--s 000e0000 08:06 4597703                    /home/marc/bin/Fiji.app/jars/scifio-0.23.0.jar
7f80c002d000-7f80c002f000 r--s 00005000 08:06 4241227                    /home/marc/bin/Fiji.app/jars/object-inspector-0.1.jar
7f80c002f000-7f80c0034000 r--s 00060000 08:06 4241216                    /home/marc/bin/Fiji.app/jars/mapdb-1.0.3.jar
7f80c0034000-7f80c003d000 r--s 0006f000 08:06 4241213                    /home/marc/bin/Fiji.app/jars/log4j-1.2.17.jar
7f80c003d000-7f80c003e000 r--s 00003000 08:06 4241228                    /home/marc/bin/Fiji.app/jars/options-1.1.jar
7f80c003e000-7f80c0041000 r--s 0002c000 08:06 4241267                    /home/marc/bin/Fiji.app/jars/yecht-1.0.jar
7f80c0041000-7f80c0043000 r--s 00007000 08:06 4241224                    /home/marc/bin/Fiji.app/jars/nailgun-server-0.9.1.jar
7f80c0043000-7f80c0044000 r--s 00008000 08:06 4241168                    /home/marc/bin/Fiji.app/jars/invokebinder-1.2.jar
7f80c0044000-7f80c0046000 r--s 00010000 08:06 4241210                    /home/marc/bin/Fiji.app/jars/jzlib-1.1.2.jar
7f80c0046000-7f80c004c000 r--s 0003d000 08:06 4241258                    /home/marc/bin/Fiji.app/jars/snakeyaml-1.13.jar
7f80c004c000-7f80c004e000 r--s 0005d000 08:06 4241185                    /home/marc/bin/Fiji.app/jars/jffi-1.2.7-native.jar
7f80c004e000-7f80c0052000 r--s 00020000 08:06 4241186                    /home/marc/bin/Fiji.app/jars/jffi-1.2.7.jar
7f80c0052000-7f80c0062000 r--s 0008e000 08:06 4241197                    /home/marc/bin/Fiji.app/jars/jnr-ffi-1.0.7.jar
7f80c0062000-7f80c006b000 r--s 00133000 08:06 4241178                    /home/marc/bin/Fiji.app/jars/jcodings-1.0.10.jar
7f80c006b000-7f80c0070000 r--s 00048000 08:06 4241195                    /home/marc/bin/Fiji.app/jars/jnr-constants-0.8.5.jar
7f80c0070000-7f80c0071000 r--s 00002000 08:06 4241131                    /home/marc/bin/Fiji.app/jars/bytelist-1.0.11.jar
7f80c0071000-7f80c0075000 r--s 00023000 08:06 4241199                    /home/marc/bin/Fiji.app/jars/jnr-posix-3.0.1.jar
7f80c0075000-7f80c0077000 r--s 00004000 08:06 4241200                    /home/marc/bin/Fiji.app/jars/jnr-unixsocket-0.3.jar
7f80c0077000-7f80c007a000 r--s 00033000 08:06 4241201                    /home/marc/bin/Fiji.app/jars/jnr-x86asm-1.0.2.jar
7f80c007a000-7f80c007c000 r--s 00007000 08:06 4241196                    /home/marc/bin/Fiji.app/jars/jnr-enxio-0.4.jar
7f80c007c000-7f80c007f000 r--s 0000d000 08:06 4241198                    /home/marc/bin/Fiji.app/jars/jnr-netdb-1.1.2.jar
7f80c007f000-7f80c0081000 r--s 00008000 08:06 4241113                    /home/marc/bin/Fiji.app/jars/asm-util-4.0.jar
7f80c0081000-7f80c0082000 r--s 00004000 08:06 4241110                    /home/marc/bin/Fiji.app/jars/asm-analysis-4.0.jar
7f80c0082000-7f80c0084000 r--s 00004000 08:06 4241112                    /home/marc/bin/Fiji.app/jars/asm-tree-4.0.jar
7f80c0084000-7f80c0086000 r--s 00008000 08:06 4241111                    /home/marc/bin/Fiji.app/jars/asm-commons-4.0.jar
7f80c0086000-7f80c012d000 r--s 0073b000 08:06 4241205                    /home/marc/bin/Fiji.app/jars/jruby-core-1.7.12.jar
7f80c012d000-7f80c0167000 r--s 00302000 08:06 4241132                    /home/marc/bin/Fiji.app/jars/clojure-1.3.0.jar
7f80c0167000-7f80c016c000 r--s 00040000 08:06 4241130                    /home/marc/bin/Fiji.app/jars/bsh-2.0b4.jar
7f80c016c000-7f80c0172000 r--s 00048000 08:06 4241133                    /home/marc/bin/Fiji.app/jars/commons-lang3-3.1.jar
7f80c0172000-7f80c0174000 r--s 00000000 08:06 4241247                    /home/marc/bin/Fiji.app/jars/scijava-plugins-text-plain-0.1.1.jar
7f80c0174000-7f80c0176000 r--s 00009000 08:06 4241217                    /home/marc/bin/Fiji.app/jars/markdownj-0.3.0-1.0.2b4.jar
7f80c0176000-7f80c0178000 r--s 00000000 08:06 4241246                    /home/marc/bin/Fiji.app/jars/scijava-plugins-text-markdown-0.1.1.jar
7f80c0178000-7f80c017a000 r--s 00003000 08:06 4241115                    /home/marc/bin/Fiji.app/jars/base64-2.3.8.jar
7f80c017a000-7f80c017c000 r--s 00003000 08:06 4241154                    /home/marc/bin/Fiji.app/jars/imagej-plugins-uploader-webdav-0.2.0.jar
7f80c017c000-7f80c017e000 r--s 0000d000 08:06 4241221                    /home/marc/bin/Fiji.app/jars/minimaven-2.1.3.jar
7f80c017e000-7f80c0180000 r--s 00007000 08:06 4241180                    /home/marc/bin/Fiji.app/jars/jdatepicker-1.3.2.jar
7f80c0180000-7f80c01a1000 r--s 001e0000 08:06 4241193                    /home/marc/bin/Fiji.app/jars/jhotdraw-7.6.0.jar
7f80c01a1000-7f80c01ac000 r--s 000e4000 08:06 4241233                    /home/marc/bin/Fiji.app/jars/rsyntaxtextarea-2.5.2.jar
7f80c01ac000-7f80c01ae000 r--s 00014000 08:06 4241139                    /home/marc/bin/Fiji.app/jars/fiji-lib-2.1.0.jar
7f80c01ae000-7f80c01b5000 r--s 0008e000 08:06 4241102                    /home/marc/bin/Fiji.app/jars/VIB-lib-2.0.1.jar
7f80c01b5000-7f80c01c4000 r--s 00139000 08:06 4241220                    /home/marc/bin/Fiji.app/jars/mines-jtk-20100113.jar
7f80c01c4000-7f80c01ca000 r--s 0003d000 08:06 4241214                    /home/marc/bin/Fiji.app/jars/logback-classic-1.1.1.jar
7f80c01ca000-7f80c01d4000 r--s 0005f000 08:06 4241215                    /home/marc/bin/Fiji.app/jars/logback-core-1.1.1.jar
7f80c01d4000-7f80c01d7000 r--s 00018000 08:06 4241231                    /home/marc/bin/Fiji.app/jars/perf4j-0.9.13.jar
7f80c01d7000-7f80c01d9000 r--s 00007000 08:06 4241188                    /home/marc/bin/Fiji.app/jars/jgoodies-common-1.7.0.jar
7f80c01d9000-7f80c01db000 r--s 0001b000 08:06 4241189                    /home/marc/bin/Fiji.app/jars/jgoodies-forms-1.7.2.jar
7f80c01db000-7f80c01dd000 r--s 00006000 08:06 4241257                    /home/marc/bin/Fiji.app/jars/slf4j-api-1.7.6.jar
7f80c01dd000-7f80c01df000 r--s 00009000 08:06 4241229                    /home/marc/bin/Fiji.app/jars/pal-optimization-2.0.0.jar
7f80c01df000-7f80c01f3000 r--s 001bd000 08:06 4241173                    /home/marc/bin/Fiji.app/jars/jai-core-1.1.3.jar
7f80c01f3000-7f80c01f7000 r--s 0003c000 08:06 4241172                    /home/marc/bin/Fiji.app/jars/jai-codec-1.1.3.jar
7f80c01f7000-7f80c01fc000 r--s 00065000 08:06 4241232                    /home/marc/bin/Fiji.app/jars/postgresql-8.2-507.jdbc3.jar
7f80c01fc000-7f80c021d000 r--s 0015a000 08:06 4241117                    /home/marc/bin/Fiji.app/jars/bcprov-jdk14-138.jar
7f80c021d000-7f80c0221000 r--s 0002b000 08:06 4241116                    /home/marc/bin/Fiji.app/jars/bcmail-jdk14-138.jar
7f80c0221000-7f80c026a000 r--s 003fa000 08:06 4241142                    /home/marc/bin/Fiji.app/jars/groovy-2.3.6.jar
7f80c026a000-7f80c026b000 ---p 00000000 00:00 0 
7f80c026b000-7f80c046c000 rwxp 00000000 00:00 0                          [stack:7523]
7f80c046c000-7f80c046d000 ---p 00000000 00:00 0 
7f80c046d000-7f80c056d000 rwxp 00000000 00:00 0                          [stack:7522]
7f80c056d000-7f80c056e000 ---p 00000000 00:00 0 
7f80c056e000-7f80c066e000 rwxp 00000000 00:00 0                          [stack:7521]
7f80c066e000-7f80c066f000 ---p 00000000 00:00 0 
7f80c066f000-7f80c076f000 rwxp 00000000 00:00 0                          [stack:7520]
7f80c076f000-7f80c0770000 ---p 00000000 00:00 0 
7f80c0770000-7f80c0c74000 rwxp 00000000 00:00 0                          [stack:7515]
7f80c0c74000-7f80c0c75000 ---p 00000000 00:00 0 
7f80c0c75000-7f80c0d75000 rwxp 00000000 00:00 0                          [stack:7514]
7f80c0d75000-7f80c0dc4000 rw-p 00000000 00:00 0 
7f80c0dc4000-7f80c0f9d000 r--s 03d09000 08:05 103507                     /usr/lib/jvm/java-8-oracle/jre/lib/rt.jar
7f80c0f9d000-7f80c186e000 rw-p 00000000 00:00 0 
7f80c186e000-7f80c19fa000 rw-p 00000000 00:00 0 
7f80c19fa000-7f80c19fb000 ---p 00000000 00:00 0 
7f80c19fb000-7f80c1afb000 rwxp 00000000 00:00 0                          [stack:7513]
7f80c1afb000-7f80c4000000 rw-p 00000000 00:00 0 
7f80c4000000-7f80c4021000 rw-p 00000000 00:00 0 
7f80c4021000-7f80c8000000 ---p 00000000 00:00 0 
7f80c8000000-7f80c8021000 rw-p 00000000 00:00 0 
7f80c8021000-7f80cc000000 ---p 00000000 00:00 0 
7f80cc000000-7f80cc021000 rw-p 00000000 00:00 0 
7f80cc021000-7f80d0000000 ---p 00000000 00:00 0 
7f80d0000000-7f80d0021000 rw-p 00000000 00:00 0 
7f80d0021000-7f80d4000000 ---p 00000000 00:00 0 
7f80d4000000-7f80d4021000 rw-p 00000000 00:00 0 
7f80d4021000-7f80d8000000 ---p 00000000 00:00 0 
7f80d8000000-7f80d8021000 rw-p 00000000 00:00 0 
7f80d8021000-7f80dc000000 ---p 00000000 00:00 0 
7f80dc000000-7f80dc021000 rw-p 00000000 00:00 0 
7f80dc021000-7f80e0000000 ---p 00000000 00:00 0 
7f80e0000000-7f80e0001000 r--s 00001000 08:06 4241251                    /home/marc/bin/Fiji.app/jars/scripting-clojure-0.1.1.jar
7f80e0001000-7f80e0002000 r--s 0000a000 08:06 4241103                    /home/marc/bin/Fiji.app/jars/VectorString-1.0.2.jar
7f80e0002000-7f80e000e000 r--s 00105000 08:06 4241169                    /home/marc/bin/Fiji.app/jars/itext-2.1.5.jar
7f80e000e000-7f80e0011000 r--s 00046000 08:06 4241158                    /home/marc/bin/Fiji.app/jars/imagescience-2.5.0.jar
7f80e0011000-7f80e0013000 r--s 00009000 08:06 4984953                    /home/marc/bin/Fiji.app/jars/scijava-expression-parser-2.1.0.jar
7f80e0013000-7f80e001e000 r--s 0007e000 08:06 4984946                    /home/marc/bin/Fiji.app/jars/imglib2-2.2.1.jar
7f80e001e000-7f80e03e7000 rw-p 00000000 00:00 0 
7f80e03e7000-7f80e03e8000 ---p 00000000 00:00 0 
7f80e03e8000-7f80e04e8000 rwxp 00000000 00:00 0                          [stack:7512]
7f80e04e8000-7f80e04e9000 ---p 00000000 00:00 0 
7f80e04e9000-7f80e05e9000 rwxp 00000000 00:00 0                          [stack:7511]
7f80e05e9000-7f80e1000000 rw-p 00000000 00:00 0 
7f80e1000000-7f80e1a90000 rwxp 00000000 00:00 0 
7f80e1a90000-7f80f0000000 ---p 00000000 00:00 0 
7f80f0000000-7f80f00e0000 rw-p 00000000 00:00 0 
7f80f00e0000-7f80f4000000 ---p 00000000 00:00 0 
7f80f4000000-7f80f4002000 r--s 00001000 08:06 4241260                    /home/marc/bin/Fiji.app/jars/swing-checkbox-tree-1.0.0.jar
7f80f4002000-7f80f4005000 r--s 00035000 08:06 4241208                    /home/marc/bin/Fiji.app/jars/jsch-0.1.49.jar
7f80f4005000-7f80f4007000 r--s 0001d000 08:06 4241262                    /home/marc/bin/Fiji.app/jars/udunits-4.3.18.jar
7f80f4007000-7f80f4009000 r--s 00004000 08:06 4241153                    /home/marc/bin/Fiji.app/jars/imagej-plugins-uploader-ssh-0.2.0.jar
7f80f4009000-7f80f4016000 r--s 000d8000 08:06 4463736                    /home/marc/bin/Fiji.app/jars/bio-formats/ome-poi-5.1.2.jar
7f80f4016000-7f80f4667000 rw-p 00000000 00:00 0 
7f80f4667000-7f80f4668000 ---p 00000000 00:00 0 
7f80f4668000-7f80f4768000 rwxp 00000000 00:00 0                          [stack:7510]
7f80f4768000-7f80f4769000 ---p 00000000 00:00 0 
7f80f4769000-7f80f4869000 rwxp 00000000 00:00 0                          [stack:7509]
7f80f4869000-7f80f486a000 ---p 00000000 00:00 0 
7f80f486a000-7f80f496a000 rwxp 00000000 00:00 0                          [stack:7508]
7f80f496a000-7f80f496b000 ---p 00000000 00:00 0 
7f80f496b000-7f80f4a6b000 rwxp 00000000 00:00 0                          [stack:7507]
7f80f4a6b000-7f80f4a6c000 ---p 00000000 00:00 0 
7f80f4a6c000-7f80f4b6c000 rwxp 00000000 00:00 0                          [stack:7506]
7f80f4b6c000-7f80f4b6d000 ---p 00000000 00:00 0 
7f80f4b6d000-7f80f4c6d000 rwxp 00000000 00:00 0                          [stack:7505]
7f80f4c6d000-7f80f4c6e000 ---p 00000000 00:00 0 
7f80f4c6e000-7f80f4d6e000 rwxp 00000000 00:00 0                          [stack:7504]
7f80f4d6e000-7f80f4d99000 rw-p 00000000 00:00 0 
7f80f4d99000-7f80f512e000 ---p 00000000 00:00 0 
7f80f512e000-7f80f5148000 r-xp 00000000 08:05 103395                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libzip.so
7f80f5148000-7f80f5348000 ---p 0001a000 08:05 103395                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libzip.so
7f80f5348000-7f80f5349000 rw-p 0001a000 08:05 103395                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libzip.so
7f80f5349000-7f80f5354000 r-xp 00000000 08:05 264516                     /lib/x86_64-linux-gnu/libnss_files-2.19.so
7f80f5354000-7f80f5553000 ---p 0000b000 08:05 264516                     /lib/x86_64-linux-gnu/libnss_files-2.19.so
7f80f5553000-7f80f5554000 r--p 0000a000 08:05 264516                     /lib/x86_64-linux-gnu/libnss_files-2.19.so
7f80f5554000-7f80f5555000 rw-p 0000b000 08:05 264516                     /lib/x86_64-linux-gnu/libnss_files-2.19.so
7f80f5555000-7f80f5560000 r-xp 00000000 08:05 274668                     /lib/x86_64-linux-gnu/libnss_nis-2.19.so
7f80f5560000-7f80f575f000 ---p 0000b000 08:05 274668                     /lib/x86_64-linux-gnu/libnss_nis-2.19.so
7f80f575f000-7f80f5760000 r--p 0000a000 08:05 274668                     /lib/x86_64-linux-gnu/libnss_nis-2.19.so
7f80f5760000-7f80f5761000 rw-p 0000b000 08:05 274668                     /lib/x86_64-linux-gnu/libnss_nis-2.19.so
7f80f5761000-7f80f5778000 r-xp 00000000 08:05 274645                     /lib/x86_64-linux-gnu/libnsl-2.19.so
7f80f5778000-7f80f5977000 ---p 00017000 08:05 274645                     /lib/x86_64-linux-gnu/libnsl-2.19.so
7f80f5977000-7f80f5978000 r--p 00016000 08:05 274645                     /lib/x86_64-linux-gnu/libnsl-2.19.so
7f80f5978000-7f80f5979000 rw-p 00017000 08:05 274645                     /lib/x86_64-linux-gnu/libnsl-2.19.so
7f80f5979000-7f80f597b000 rw-p 00000000 00:00 0 
7f80f597b000-7f80f5984000 r-xp 00000000 08:05 274644                     /lib/x86_64-linux-gnu/libnss_compat-2.19.so
7f80f5984000-7f80f5b83000 ---p 00009000 08:05 274644                     /lib/x86_64-linux-gnu/libnss_compat-2.19.so
7f80f5b83000-7f80f5b84000 r--p 00008000 08:05 274644                     /lib/x86_64-linux-gnu/libnss_compat-2.19.so
7f80f5b84000-7f80f5b85000 rw-p 00009000 08:05 274644                     /lib/x86_64-linux-gnu/libnss_compat-2.19.so
7f80f5b85000-7f80f5baf000 r-xp 00000000 08:05 103349                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libjava.so
7f80f5baf000-7f80f5daf000 ---p 0002a000 08:05 103349                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libjava.so
7f80f5daf000-7f80f5db1000 rw-p 0002a000 08:05 103349                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libjava.so
7f80f5db1000-7f80f5dbe000 r-xp 00000000 08:05 103368                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libverify.so
7f80f5dbe000-7f80f5fbe000 ---p 0000d000 08:05 103368                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libverify.so
7f80f5fbe000-7f80f5fc0000 rw-p 0000d000 08:05 103368                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libverify.so
7f80f5fc0000-7f80f5fc7000 r-xp 00000000 08:05 274662                     /lib/x86_64-linux-gnu/librt-2.19.so
7f80f5fc7000-7f80f61c6000 ---p 00007000 08:05 274662                     /lib/x86_64-linux-gnu/librt-2.19.so
7f80f61c6000-7f80f61c7000 r--p 00006000 08:05 274662                     /lib/x86_64-linux-gnu/librt-2.19.so
7f80f61c7000-7f80f61c8000 rw-p 00007000 08:05 274662                     /lib/x86_64-linux-gnu/librt-2.19.so
7f80f61c8000-7f80f6e76000 r-xp 00000000 08:05 103386                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/server/libjvm.so
7f80f6e76000-7f80f7075000 ---p 00cae000 08:05 103386                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/server/libjvm.so
7f80f7075000-7f80f714c000 rw-p 00cad000 08:05 103386                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/server/libjvm.so
7f80f714c000-7f80f7190000 rw-p 00000000 00:00 0 
7f80f7190000-7f80f7195000 r-xp 00000000 08:05 1187084                    /usr/lib/x86_64-linux-gnu/libXfixes.so.3.1.0
7f80f7195000-7f80f7394000 ---p 00005000 08:05 1187084                    /usr/lib/x86_64-linux-gnu/libXfixes.so.3.1.0
7f80f7394000-7f80f7395000 r--p 00004000 08:05 1187084                    /usr/lib/x86_64-linux-gnu/libXfixes.so.3.1.0
7f80f7395000-7f80f7396000 rw-p 00005000 08:05 1187084                    /usr/lib/x86_64-linux-gnu/libXfixes.so.3.1.0
7f80f7396000-7f80f739f000 r-xp 00000000 08:05 1187710                    /usr/lib/x86_64-linux-gnu/libXrender.so.1.3.0
7f80f739f000-7f80f759e000 ---p 00009000 08:05 1187710                    /usr/lib/x86_64-linux-gnu/libXrender.so.1.3.0
7f80f759e000-7f80f759f000 r--p 00008000 08:05 1187710                    /usr/lib/x86_64-linux-gnu/libXrender.so.1.3.0
7f80f759f000-7f80f75a0000 rw-p 00009000 08:05 1187710                    /usr/lib/x86_64-linux-gnu/libXrender.so.1.3.0
7f80f75a0000-7f80f75a9000 r-xp 00000000 08:05 1186477                    /usr/lib/x86_64-linux-gnu/libXcursor.so.1.0.2
7f80f75a9000-7f80f77a8000 ---p 00009000 08:05 1186477                    /usr/lib/x86_64-linux-gnu/libXcursor.so.1.0.2
7f80f77a8000-7f80f77a9000 r--p 00008000 08:05 1186477                    /usr/lib/x86_64-linux-gnu/libXcursor.so.1.0.2
7f80f77a9000-7f80f77aa000 rw-p 00009000 08:05 1186477                    /usr/lib/x86_64-linux-gnu/libXcursor.so.1.0.2
7f80f77aa000-7f80f7a73000 r--p 00000000 08:05 1203425                    /usr/lib/locale/locale-archive
7f80f7a73000-7f80f7a74000 ---p 00000000 00:00 0 
7f80f7a74000-7f80f8274000 rwxp 00000000 00:00 0 
7f80f8274000-7f80f8279000 r-xp 00000000 08:05 1191407                    /usr/lib/x86_64-linux-gnu/libXdmcp.so.6.0.0
7f80f8279000-7f80f8478000 ---p 00005000 08:05 1191407                    /usr/lib/x86_64-linux-gnu/libXdmcp.so.6.0.0
7f80f8478000-7f80f8479000 r--p 00004000 08:05 1191407                    /usr/lib/x86_64-linux-gnu/libXdmcp.so.6.0.0
7f80f8479000-7f80f847a000 rw-p 00005000 08:05 1191407                    /usr/lib/x86_64-linux-gnu/libXdmcp.so.6.0.0
7f80f847a000-7f80f847c000 r-xp 00000000 08:05 1187280                    /usr/lib/x86_64-linux-gnu/libXau.so.6.0.0
7f80f847c000-7f80f867c000 ---p 00002000 08:05 1187280                    /usr/lib/x86_64-linux-gnu/libXau.so.6.0.0
7f80f867c000-7f80f867d000 r--p 00002000 08:05 1187280                    /usr/lib/x86_64-linux-gnu/libXau.so.6.0.0
7f80f867d000-7f80f867e000 rw-p 00003000 08:05 1187280                    /usr/lib/x86_64-linux-gnu/libXau.so.6.0.0
7f80f867e000-7f80f869b000 r-xp 00000000 08:05 1187535                    /usr/lib/x86_64-linux-gnu/libxcb.so.1.1.0
7f80f869b000-7f80f889b000 ---p 0001d000 08:05 1187535                    /usr/lib/x86_64-linux-gnu/libxcb.so.1.1.0
7f80f889b000-7f80f889c000 r--p 0001d000 08:05 1187535                    /usr/lib/x86_64-linux-gnu/libxcb.so.1.1.0
7f80f889c000-7f80f889d000 rw-p 0001e000 08:05 1187535                    /usr/lib/x86_64-linux-gnu/libxcb.so.1.1.0
7f80f889d000-7f80f89a2000 r-xp 00000000 08:05 264452                     /lib/x86_64-linux-gnu/libm-2.19.so
7f80f89a2000-7f80f8ba1000 ---p 00105000 08:05 264452                     /lib/x86_64-linux-gnu/libm-2.19.so
7f80f8ba1000-7f80f8ba2000 r--p 00104000 08:05 264452                     /lib/x86_64-linux-gnu/libm-2.19.so
7f80f8ba2000-7f80f8ba3000 rw-p 00105000 08:05 264452                     /lib/x86_64-linux-gnu/libm-2.19.so
7f80f8ba3000-7f80f8bb4000 r-xp 00000000 08:05 1184595                    /usr/lib/x86_64-linux-gnu/libXext.so.6.4.0
7f80f8bb4000-7f80f8db3000 ---p 00011000 08:05 1184595                    /usr/lib/x86_64-linux-gnu/libXext.so.6.4.0
7f80f8db3000-7f80f8db4000 r--p 00010000 08:05 1184595                    /usr/lib/x86_64-linux-gnu/libXext.so.6.4.0
7f80f8db4000-7f80f8db5000 rw-p 00011000 08:05 1184595                    /usr/lib/x86_64-linux-gnu/libXext.so.6.4.0
7f80f8db5000-7f80f8ee5000 r-xp 00000000 08:05 1187633                    /usr/lib/x86_64-linux-gnu/libX11.so.6.3.0
7f80f8ee5000-7f80f90e5000 ---p 00130000 08:05 1187633                    /usr/lib/x86_64-linux-gnu/libX11.so.6.3.0
7f80f90e5000-7f80f90e6000 r--p 00130000 08:05 1187633                    /usr/lib/x86_64-linux-gnu/libX11.so.6.3.0
7f80f90e6000-7f80f90ea000 rw-p 00131000 08:05 1187633                    /usr/lib/x86_64-linux-gnu/libX11.so.6.3.0
7f80f90ea000-7f80f914b000 r-xp 00000000 08:05 103370                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libsplashscreen.so
7f80f914b000-7f80f934a000 ---p 00061000 08:05 103370                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libsplashscreen.so
7f80f934a000-7f80f934b000 rw-p 00060000 08:05 103370                     /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libsplashscreen.so
7f80f934b000-7f80f934e000 rw-p 00000000 00:00 0 
7f80f934e000-7f80f9509000 r-xp 00000000 08:05 274656                     /lib/x86_64-linux-gnu/libc-2.19.so
7f80f9509000-7f80f9708000 ---p 001bb000 08:05 274656                     /lib/x86_64-linux-gnu/libc-2.19.so
7f80f9708000-7f80f970c000 r--p 001ba000 08:05 274656                     /lib/x86_64-linux-gnu/libc-2.19.so
7f80f970c000-7f80f970e000 rw-p 001be000 08:05 274656                     /lib/x86_64-linux-gnu/libc-2.19.so
7f80f970e000-7f80f9713000 rw-p 00000000 00:00 0 
7f80f9713000-7f80f972c000 r-xp 00000000 08:05 274658                     /lib/x86_64-linux-gnu/libpthread-2.19.so
7f80f972c000-7f80f992b000 ---p 00019000 08:05 274658                     /lib/x86_64-linux-gnu/libpthread-2.19.so
7f80f992b000-7f80f992c000 r--p 00018000 08:05 274658                     /lib/x86_64-linux-gnu/libpthread-2.19.so
7f80f992c000-7f80f992d000 rw-p 00019000 08:05 274658                     /lib/x86_64-linux-gnu/libpthread-2.19.so
7f80f992d000-7f80f9931000 rw-p 00000000 00:00 0 
7f80f9931000-7f80f9934000 r-xp 00000000 08:05 274638                     /lib/x86_64-linux-gnu/libdl-2.19.so
7f80f9934000-7f80f9b33000 ---p 00003000 08:05 274638                     /lib/x86_64-linux-gnu/libdl-2.19.so
7f80f9b33000-7f80f9b34000 r--p 00002000 08:05 274638                     /lib/x86_64-linux-gnu/libdl-2.19.so
7f80f9b34000-7f80f9b35000 rw-p 00003000 08:05 274638                     /lib/x86_64-linux-gnu/libdl-2.19.so
7f80f9b35000-7f80f9b58000 r-xp 00000000 08:05 274650                     /lib/x86_64-linux-gnu/ld-2.19.so
7f80f9b58000-7f80f9b59000 r--s 00001000 08:06 5119807                    /home/marc/bin/Fiji.app/jars/T2-TreelineGraph-1.1.0.jar
7f80f9b59000-7f80f9b5c000 r--s 00013000 08:06 4463734                    /home/marc/bin/Fiji.app/jars/bio-formats/mdbtools-java-5.1.2.jar
7f80f9b5c000-7f80f9b9e000 rw-p 00000000 00:00 0 
7f80f9b9e000-7f80f9b9f000 ---p 00000000 00:00 0 
7f80f9b9f000-7f80f9ca0000 rwxp 00000000 00:00 0                          [stack:7503]
7f80f9ca0000-7f80f9ca7000 rwxp 00000000 00:00 0 
7f80f9ca7000-7f80f9cae000 r--s 00000000 08:05 1201569                    /usr/local/cuda-7.0/targets/x86_64-linux/lib/libOpenCL.so
7f80f9cae000-7f80f9ce0000 rw-s 00000000 00:04 5144596                    /SYSV00000000 (deleted)
7f80f9ce0000-7f80f9ce7000 r--s 00122000 08:06 4463732                    /home/marc/bin/Fiji.app/jars/bio-formats/formats-gpl-5.1.2.jar
7f80f9ce7000-7f80f9ce9000 r--s 0013b000 08:06 4463739                    /home/marc/bin/Fiji.app/jars/bio-formats/turbojpeg-5.1.2.jar
7f80f9ce9000-7f80f9cee000 r--s 00091000 08:06 4463738                    /home/marc/bin/Fiji.app/jars/bio-formats/specification-5.1.2.jar
7f80f9cee000-7f80f9cfd000 r--s 000ed000 08:06 4463733                    /home/marc/bin/Fiji.app/jars/bio-formats/jai_imageio-5.1.2.jar
7f80f9cfd000-7f80f9d03000 r--s 0008f000 08:06 4463737                    /home/marc/bin/Fiji.app/jars/bio-formats/ome-xml-5.1.2.jar
7f80f9d03000-7f80f9d05000 r--s 0001b000 08:06 4463731                    /home/marc/bin/Fiji.app/jars/bio-formats/formats-common-5.1.2.jar
7f80f9d05000-7f80f9d07000 r--s 00022000 08:06 4463729                    /home/marc/bin/Fiji.app/jars/bio-formats/formats-api-5.1.2.jar
7f80f9d07000-7f80f9d0c000 r--s 000a2000 08:06 4463730                    /home/marc/bin/Fiji.app/jars/bio-formats/formats-bsd-5.1.2.jar
7f80f9d0c000-7f80f9d0e000 r--s 0000a000 08:06 4241109                    /home/marc/bin/Fiji.app/jars/asm-4.0.jar
7f80f9d0e000-7f80f9d11000 r--s 0002b000 08:06 4241203                    /home/marc/bin/Fiji.app/jars/joni-2.1.1.jar
7f80f9d11000-7f80f9d21000 r--s 000e2000 08:06 4241238                    /home/marc/bin/Fiji.app/jars/scifio-jai-imageio-1.1.0.jar
7f80f9d21000-7f80f9d25000 rw-p 00000000 00:00 0 
7f80f9d25000-7f80f9d26000 r--s 00002000 08:06 4463735                    /home/marc/bin/Fiji.app/jars/bio-formats/metakit-5.1.2.jar
7f80f9d26000-7f80f9d2c000 r--s 0004b000 08:06 4241179                    /home/marc/bin/Fiji.app/jars/jcommon-1.0.23.jar
7f80f9d2c000-7f80f9d2f000 r--s 00012000 08:06 4241136                    /home/marc/bin/Fiji.app/jars/eventbus-1.4.jar
7f80f9d2f000-7f80f9d31000 r--s 00003000 08:06 4241141                    /home/marc/bin/Fiji.app/jars/gentyref-1.1.0.jar
7f80f9d31000-7f80f9d32000 r--s 00003000 08:06 4241252                    /home/marc/bin/Fiji.app/jars/scripting-groovy-0.2.0.jar
7f80f9d32000-7f80f9d34000 r--s 00011000 08:06 4241218                    /home/marc/bin/Fiji.app/jars/miglayout-3.7.4-swing.jar
7f80f9d34000-7f80f9d37000 r--s 00014000 08:06 4196006                    /home/marc/bin/Fiji.app/jars/CoreMem-0.1.0.jar
7f80f9d37000-7f80f9d38000 r--s 00003000 08:06 5119817                    /home/marc/bin/Fiji.app/jars/opencsv-2.0.jar
7f80f9d38000-7f80f9d3a000 r--s 00008000 08:06 4241174                    /home/marc/bin/Fiji.app/jars/jama-1.0.3.jar
7f80f9d3a000-7f80f9d43000 r--s 0007f000 08:06 4241184                    /home/marc/bin/Fiji.app/jars/jep-2.4.2.jar
7f80f9d43000-7f80f9d4b000 rw-s 00000000 08:05 529500                     /tmp/hsperfdata_marc/7501
7f80f9d4b000-7f80f9d4c000 rw-p 00000000 00:00 0 
7f80f9d4c000-7f80f9d4d000 r--p 00000000 00:00 0 
7f80f9d4d000-7f80f9d4e000 r--s 00004000 08:06 4241148                    /home/marc/bin/Fiji.app/jars/imagej-launcher-3.1.6.jar
7f80f9d4e000-7f80f9d55000 r--s 00000000 08:05 204874                     /usr/lib/x86_64-linux-gnu/gconv/gconv-modules.cache
7f80f9d55000-7f80f9d57000 rw-p 00000000 00:00 0 
7f80f9d57000-7f80f9d58000 r--p 00022000 08:05 274650                     /lib/x86_64-linux-gnu/ld-2.19.so
7f80f9d58000-7f80f9d59000 rw-p 00023000 08:05 274650                     /lib/x86_64-linux-gnu/ld-2.19.so
7f80f9d59000-7f80f9d5a000 rw-p 00000000 00:00 0 
7fffdecb1000-7fffdecb4000 ---p 00000000 00:00 0 
7fffdecb5000-7fffdedae000 rwxp 00000000 00:00 0                          [stack]
7fffdedae000-7fffdedb1000 rw-p 00000000 00:00 0 
7fffdedcf000-7fffdedd1000 r-xp 00000000 00:00 0                          [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0                  [vsyscall]

VM Arguments:
jvm_args: -Dpython.cachedir.skip=true -Dplugins.dir=/home/marc/bin/Fiji.app -Xmx33765m -Xincgc -XX:PermSize=128m 
java_command: <unknown>
java_class_path (initial): /home/marc/bin/Fiji.app/jars/imagej-launcher-3.1.6.jar
Launcher Type: generic

Environment Variables:
JAVA_HOME=/usr/lib/jvm/java-8-oracle/jre
PATH=/home/marc/google-cloud-sdk/bin:/home/marc/texlive/2014/bin/x86_64-linux:/home/marc/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games
LD_LIBRARY_PATH=.:/home/marc/lib:/usr/local/cuda/lib64:/usr/local/cuda/nvvm/lib64::/home/marc/bin/Fiji.app/lib/linux64:/home/marc/bin/Fiji.app/mm/linux64
SHELL=/bin/bash
DISPLAY=:0

Signal Handlers:
SIGSEGV: [libjvm.so+0xaad1e0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGBUS: [libjvm.so+0xaad1e0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGFPE: [libjvm.so+0x90b450], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGPIPE: [libjvm.so+0x90b450], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGXFSZ: [libjvm.so+0x90b450], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGILL: [libjvm.so+0x90b450], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGUSR1: SIG_DFL, sa_mask[0]=00000000000000000000000000000000, sa_flags=none
SIGUSR2: [libjvm.so+0x90ca90], sa_mask[0]=00000000000000000000000000000000, sa_flags=SA_RESTART|SA_SIGINFO
SIGHUP: [libjvm.so+0x90dde0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGINT: [libjvm.so+0x90dde0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGTERM: [libjvm.so+0x90dde0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGQUIT: [libjvm.so+0x90dde0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO

---------------  S Y S T E M  ---------------

OS:DISTRIB_ID=Ubuntu
DISTRIB_RELEASE=14.04
DISTRIB_CODENAME=trusty
DISTRIB_DESCRIPTION="Ubuntu 14.04.2 LTS"

uname:Linux 3.13.0-53-generic #89-Ubuntu SMP Wed May 20 10:34:39 UTC 2015 x86_64
libc:glibc 2.19 NPTL 2.19 
rlimit: STACK 8192k, CORE 0k, NPROC 384033, NOFILE 4096, AS infinity
load average:1.06 0.65 0.52

/proc/meminfo:
MemTotal:       49401832 kB
MemFree:        36075148 kB
Buffers:          944860 kB
Cached:          7788800 kB
SwapCached:            0 kB
Active:          7357600 kB
Inactive:        4999292 kB
Active(anon):    3624916 kB
Inactive(anon):    13200 kB
Active(file):    3732684 kB
Inactive(file):  4986092 kB
Unevictable:        2512 kB
Mlocked:            2512 kB
SwapTotal:       2109436 kB
SwapFree:        2109436 kB
Dirty:              9432 kB
Writeback:             0 kB
AnonPages:       3626232 kB
Mapped:           315320 kB
Shmem:             14580 kB
Slab:             493416 kB
SReclaimable:     366128 kB
SUnreclaim:       127288 kB
KernelStack:        6208 kB
PageTables:        44128 kB
NFS_Unstable:          0 kB
Bounce:                0 kB
WritebackTmp:          0 kB
CommitLimit:    26810352 kB
Committed_AS:    8185988 kB
VmallocTotal:   34359738367 kB
VmallocUsed:      496600 kB
VmallocChunk:   34359237628 kB
HardwareCorrupted:     0 kB
AnonHugePages:   1722368 kB
HugePages_Total:       0
HugePages_Free:        0
HugePages_Rsvd:        0
HugePages_Surp:        0
Hugepagesize:       2048 kB
DirectMap4k:      472304 kB
DirectMap2M:     9951232 kB
DirectMap1G:    41943040 kB

CPU:total 8 (4 cores per cpu, 2 threads per core) family 6 model 62 stepping 4, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3, sse4.1, sse4.2, popcnt, avx, aes, clmul, erms, ht, tsc, tscinvbit

/proc/cpuinfo:
processor   : 0
vendor_id   : GenuineIntel
cpu family  : 6
model       : 62
model name  : Intel(R) Core(TM) i7-4820K CPU @ 3.70GHz
stepping    : 4
microcode   : 0x416
cpu MHz     : 3701.000
cache size  : 10240 KB
physical id : 0
siblings    : 8
core id     : 0
cpu cores   : 4
apicid      : 0
initial apicid  : 0
fpu     : yes
fpu_exception   : yes
cpuid level : 13
wp      : yes
flags       : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc aperfmperf eagerfpu pni pclmulqdq dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm ida arat epb xsaveopt pln pts dtherm tpr_shadow vnmi flexpriority ept vpid fsgsbase smep erms
bogomips    : 7400.38
clflush size    : 64
cache_alignment : 64
address sizes   : 46 bits physical, 48 bits virtual
power management:

processor   : 1
vendor_id   : GenuineIntel
cpu family  : 6
model       : 62
model name  : Intel(R) Core(TM) i7-4820K CPU @ 3.70GHz
stepping    : 4
microcode   : 0x416
cpu MHz     : 3701.000
cache size  : 10240 KB
physical id : 0
siblings    : 8
core id     : 1
cpu cores   : 4
apicid      : 2
initial apicid  : 2
fpu     : yes
fpu_exception   : yes
cpuid level : 13
wp      : yes
flags       : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc aperfmperf eagerfpu pni pclmulqdq dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm ida arat epb xsaveopt pln pts dtherm tpr_shadow vnmi flexpriority ept vpid fsgsbase smep erms
bogomips    : 7400.38
clflush size    : 64
cache_alignment : 64
address sizes   : 46 bits physical, 48 bits virtual
power management:

processor   : 2
vendor_id   : GenuineIntel
cpu family  : 6
model       : 62
model name  : Intel(R) Core(TM) i7-4820K CPU @ 3.70GHz
stepping    : 4
microcode   : 0x416
cpu MHz     : 1200.000
cache size  : 10240 KB
physical id : 0
siblings    : 8
core id     : 2
cpu cores   : 4
apicid      : 4
initial apicid  : 4
fpu     : yes
fpu_exception   : yes
cpuid level : 13
wp      : yes
flags       : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc aperfmperf eagerfpu pni pclmulqdq dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm ida arat epb xsaveopt pln pts dtherm tpr_shadow vnmi flexpriority ept vpid fsgsbase smep erms
bogomips    : 7400.38
clflush size    : 64
cache_alignment : 64
address sizes   : 46 bits physical, 48 bits virtual
power management:

processor   : 3
vendor_id   : GenuineIntel
cpu family  : 6
model       : 62
model name  : Intel(R) Core(TM) i7-4820K CPU @ 3.70GHz
stepping    : 4
microcode   : 0x416
cpu MHz     : 3701.000
cache size  : 10240 KB
physical id : 0
siblings    : 8
core id     : 3
cpu cores   : 4
apicid      : 6
initial apicid  : 6
fpu     : yes
fpu_exception   : yes
cpuid level : 13
wp      : yes
flags       : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc aperfmperf eagerfpu pni pclmulqdq dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm ida arat epb xsaveopt pln pts dtherm tpr_shadow vnmi flexpriority ept vpid fsgsbase smep erms
bogomips    : 7400.38
clflush size    : 64
cache_alignment : 64
address sizes   : 46 bits physical, 48 bits virtual
power management:

processor   : 4
vendor_id   : GenuineIntel
cpu family  : 6
model       : 62
model name  : Intel(R) Core(TM) i7-4820K CPU @ 3.70GHz
stepping    : 4
microcode   : 0x416
cpu MHz     : 3701.000
cache size  : 10240 KB
physical id : 0
siblings    : 8
core id     : 0
cpu cores   : 4
apicid      : 1
initial apicid  : 1
fpu     : yes
fpu_exception   : yes
cpuid level : 13
wp      : yes
flags       : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc aperfmperf eagerfpu pni pclmulqdq dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm ida arat epb xsaveopt pln pts dtherm tpr_shadow vnmi flexpriority ept vpid fsgsbase smep erms
bogomips    : 7400.38
clflush size    : 64
cache_alignment : 64
address sizes   : 46 bits physical, 48 bits virtual
power management:

processor   : 5
vendor_id   : GenuineIntel
cpu family  : 6
model       : 62
model name  : Intel(R) Core(TM) i7-4820K CPU @ 3.70GHz
stepping    : 4
microcode   : 0x416
cpu MHz     : 1200.000
cache size  : 10240 KB
physical id : 0
siblings    : 8
core id     : 1
cpu cores   : 4
apicid      : 3
initial apicid  : 3
fpu     : yes
fpu_exception   : yes
cpuid level : 13
wp      : yes
flags       : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc aperfmperf eagerfpu pni pclmulqdq dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm ida arat epb xsaveopt pln pts dtherm tpr_shadow vnmi flexpriority ept vpid fsgsbase smep erms
bogomips    : 7400.38
clflush size    : 64
cache_alignment : 64
address sizes   : 46 bits physical, 48 bits virtual
power management:

processor   : 6
vendor_id   : GenuineIntel
cpu family  : 6
model       : 62
model name  : Intel(R) Core(TM) i7-4820K CPU @ 3.70GHz
stepping    : 4
microcode   : 0x416
cpu MHz     : 3701.000
cache size  : 10240 KB
physical id : 0
siblings    : 8
core id     : 2
cpu cores   : 4
apicid      : 5
initial apicid  : 5
fpu     : yes
fpu_exception   : yes
cpuid level : 13
wp      : yes
flags       : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc aperfmperf eagerfpu pni pclmulqdq dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm ida arat epb xsaveopt pln pts dtherm tpr_shadow vnmi flexpriority ept vpid fsgsbase smep erms
bogomips    : 7400.38
clflush size    : 64
cache_alignment : 64
address sizes   : 46 bits physical, 48 bits virtual
power management:

processor   : 7
vendor_id   : GenuineIntel
cpu family  : 6
model       : 62
model name  : Intel(R) Core(TM) i7-4820K CPU @ 3.70GHz
stepping    : 4
microcode   : 0x416
cpu MHz     : 3701.000
cache size  : 10240 KB
physical id : 0
siblings    : 8
core id     : 3
cpu cores   : 4
apicid      : 7
initial apicid  : 7
fpu     : yes
fpu_exception   : yes
cpuid level : 13
wp      : yes
flags       : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc aperfmperf eagerfpu pni pclmulqdq dtes64 monitor ds_cpl vmx est tm2 ssse3 cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm ida arat epb xsaveopt pln pts dtherm tpr_shadow vnmi flexpriority ept vpid fsgsbase smep erms
bogomips    : 7400.38
clflush size    : 64
cache_alignment : 64
address sizes   : 46 bits physical, 48 bits virtual
power management:

Memory: 4k page, physical 49401832k(36075148k free), swap 2109436k(2109436k free)

vm_info: Java HotSpot(TM) 64-Bit Server VM (25.45-b02) for linux-amd64 JRE (1.8.0_45-b14), built on Apr 10 2015 10:07:45 by "java_re" with gcc 4.3.0 20080428 (Red Hat 4.3.0-8)

time: Fri May 29 11:42:32 2015
elapsed time: 9 seconds (0d 0h 0m 9s)
royerloic commented 9 years ago

Ok, this seems to be a problem with JOGL . Could you test this executable JAR: https://github.com/ClearVolume/ClearGL/releases/download/1.0.0/TestProg.jar (or if you prefer compile and run the corresponding code in ClearGL cleargl.testprog.JOGLTestProgram.java) It is a simple test JOGL program. If that fails we have to fill up a bug report upstream to the JOGL Team...

mabruce commented 9 years ago

The jar's trying to load 32 bit libraries: Exception in thread "main" java.lang.UnsatisfiedLinkError: /tmp/jogamp_0000/file_cache/jln5968353291559684597/jln8154034231802500972/libnativewindow_awt.so: /tmp/jogamp_0000/file_cache/jln5968353291559684597/jln8154034231802500972/libnativewindow_awt.so: wrong ELF class: ELFCLASS32 (Possible cause: architecture word width mismatch)

royerloic commented 9 years ago

Ok thanks! I think we are getting closer. It could be that we are packaging the wrong linux binaries - which makes no sense since we don't even ship the 32bit libs only the 64bit ones. Could you check if there is any JOGL jars installed somewhere in you JDK/JRE like in the ext folder? We are going to do more testing under linux to figure out what's going on. Now we have a good lead on the cause. Thanks!

skalarproduktraum commented 9 years ago

@mabruce: I just saw in your crashlog that you are using CUDA 7.0. Unfortunately, JCuda is currently stuck at 6.5... would you mind trying it with 6.5? OpenCL unfortunately is also affected by that as CUDA includes a significant part of the OpenCL libs...

mabruce commented 9 years ago

It's the driver that supports CUDA 7.0, the drivers are backwards compatible with older runtimes, JCuda is bundled with its own run runtime, and JCuda was updated to 7.0 on April 10.

fjug commented 8 years ago

I've tried to open an RGB image and did not get an exception. (Weather or not current behavior makes sense or not is a different discussion... it gets converted to a monochrome image and then displayed.)

Also I tried to open without open image which results in a sensible error message in an dialog window.

Should we close this issue or is some stuff with @mabruce still unresolved?

elimirks commented 8 years ago

I am also having it crash when I try to open an image stack:

% uname -a

Linux yellowarmadillo 3.16.0-4-amd64 #1 SMP Debian 3.16.7-ckt11-1+deb8u3 (2015-08-04) x86_64 GNU/Linux

( I tried on an integrated Intel GPU so maybe that is what is causing this )

[ERROR] Cannot create module: de.mpicbg.jug.plugins.ClearVolumePlugin
org.scijava.module.ModuleException: org.scijava.InstantiableException: Class not found: de.mpicbg.jug.plugins.ClearVolumePlugin
    at org.scijava.command.CommandInfo.createModule(CommandInfo.java:320)
    at org.scijava.module.DefaultModuleService.createModule(DefaultModuleService.java:156)
    at org.scijava.module.DefaultModuleService.run(DefaultModuleService.java:195)
    at org.scijava.module.DefaultModuleService.run(DefaultModuleService.java:186)
    at org.scijava.module.DefaultModuleService.run(DefaultModuleService.java:171)
    at org.scijava.command.DefaultCommandService.run(DefaultCommandService.java:185)
    at net.imagej.legacy.LegacyService.runLegacyCompatibleCommand(LegacyService.java:270)
    at net.imagej.legacy.DefaultLegacyHooks.interceptRunPlugIn(DefaultLegacyHooks.java:161)
    at ij.IJ.runPlugIn(IJ.java)
    at ij.Executer.runCommand(Executer.java:136)
    at ij.Executer.run(Executer.java:65)
    at java.lang.Thread.run(Thread.java:662)
Caused by: org.scijava.InstantiableException: Class not found: de.mpicbg.jug.plugins.ClearVolumePlugin
    at org.scijava.plugin.PluginInfo.loadClass(PluginInfo.java:285)
    at org.scijava.command.CommandInfo.loadClass(CommandInfo.java:245)
    at org.scijava.command.CommandInfo.createModule(CommandInfo.java:314)
    ... 11 more

In the exception window:

(Fiji Is Just) ImageJ 2.0.0-rc-43/1.50e; Java 1.6.0_24 [64-bit]; Linux 3.16.0-4-amd64; 41MB of 2391MB (1%)

java.lang.NullPointerException
    at net.imagej.legacy.LegacyService.runLegacyCompatibleCommand(LegacyService.java:270)
    at net.imagej.legacy.DefaultLegacyHooks.interceptRunPlugIn(DefaultLegacyHooks.java:161)
    at ij.IJ.runPlugIn(IJ.java)
    at ij.Executer.runCommand(Executer.java:136)
    at ij.Executer.run(Executer.java:65)
    at java.lang.Thread.run(Thread.java:662)
ctrueden commented 8 years ago 
Caused by: org.scijava.InstantiableException: Class not found: de.mpicbg.jug.plugins.ClearVolumePlugin
    at org.scijava.plugin.PluginInfo.loadClass(PluginInfo.java:285)

FYI, this same problem sprang up during the recent hackathon in Konstanz. By which I mean: the error regarding why a class cannot be loaded is currently incomplete, due to SciJava Common eating the cause rather than chaining it. I need to fix this in SJC; see scijava/scijava-common#219 for details.

skalarproduktraum commented 8 years ago

@elimirks: You are using Java 1.6, with which ClearVolume is not compatible (you need at least 1.8).

You can either:

Btw, what kind of Intel Integrated Graphics you have? With 3000, you are out of luck, but 4000 and upwards work without problems.

skalarproduktraum commented 8 years ago

@elimirks: We have just updated the plugin, so if you get a fresh Fiji from http://fiji.sc and activate the ClearVolume update site, it should work without problems. Please let us know if it works for you as well.

elimirks commented 8 years ago

@skalarproduktraum I downloaded the latest version of Fiji and the issue is fixed, but it is complaining about OpenCL now - I have an i5 2520M, so as you said, I guess I am out of luck with this computer.

skalarproduktraum commented 8 years ago

@elimirks: Yes, that processor has only the 3000, which we currently do not support due to only a weird set of datatypes being supported (see #41). Sorry!