Clinical-Genomics / BALSAMIC

Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer
https://balsamic.readthedocs.io/
MIT License
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[User Story] Delivery report includes delivered files #1247

Closed pbiology closed 6 months ago

pbiology commented 1 year ago

Need

As a clinician I want to have a comprehensive view of the files delivered for each case, so that I can efficiently communicate and explain case details to new staff members, and easily identify cases that contain specific files.

Suggested approach

Add a list of files delivered and uploaded to Scout, including which files are delivered, where they can be found, what is in them, and how was the information generated.

Considered alternatives

No response

Deviation

No response

Risk assessment

Risk assessment link

No response

System requirements assessed

Requirements affected by this story

No response

SOUPs

No response

Can be closed when

Blockers

No response

Anything else?

No response

ivadym commented 6 months ago

I suppose we can close this: https://github.com/Clinical-Genomics/cg/pull/3029

Screenshot 2024-03-19 at 16 37 32

I'll invest some time in this PR: https://github.com/Clinical-Genomics/cg/issues/2955, where I'll also add the link to the order portal where we have the description of the files. I don't think we can use automation to include a description without it becoming messy and potentially ending up hardcoding it

FYI: @Clinical-Genomics/rna