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Clinical-Genomics
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MIP
Mutation Identification Pipeline. Read the latest documentation:
https://clinical-genomics.gitbook.io/project-mip/
MIT License
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Variant not called in MIP-analysis
#2071
AnnHam
closed
4 months ago
8
Release branch back into dev
#2070
jemten
closed
7 months ago
0
Release/12.1.0
#2069
jemten
closed
7 months ago
0
Fail analysis for mismatch gender
#2068
jemten
closed
7 months ago
0
loqus and clinvar update
#2067
jemten
closed
7 months ago
0
adds automatic ped_check fail
#2066
jemten
closed
7 months ago
2
Fastp
#2065
jemten
closed
7 months ago
1
Merge release/12.0.3 into dev
#2064
jemten
closed
10 months ago
1
Release/12.0.3
#2063
jemten
closed
10 months ago
0
PEX6 managed 3'-variant not shown
#2062
MUebe
opened
11 months ago
15
merge release 12.0.2 into develop
#2061
jemten
closed
11 months ago
0
fixes #2057
#2060
jemten
closed
11 months ago
1
Fail analysis on error in Peddy
#2059
moahaegglund
closed
7 months ago
4
Request to update initiation maps
#2058
moahaegglund
closed
7 months ago
1
Relation_check not working
#2057
moahaegglund
closed
11 months ago
1
Release/12.0.1
#2056
jemten
closed
12 months ago
0
Normalized rank score validation
#2055
torbjorgen
closed
10 months ago
3
Release/12.0.1
#2054
jemten
closed
12 months ago
1
Improper pair eval
#2053
jemten
closed
1 year ago
0
Log and evaluate PCT_PF_READS_IMPROPER_PAIRS
#2052
jemten
closed
12 months ago
1
Update CODEOWNERS
#2050
pbiology
closed
1 year ago
0
Release/12.0.0
#2048
jemten
closed
1 year ago
0
Show local variant archive date also on SV pages
#2047
dnil
opened
1 year ago
5
Simple (GenMod) rank for MEI
#2046
dnil
opened
1 year ago
0
Not called deletion in mtDNA
#2045
1ctw
opened
1 year ago
5
Most severe consequence for MEI
#2044
dnil
opened
1 year ago
0
Release/12.0.0
#2043
jemten
closed
1 year ago
0
uppdates clinvar references
#2042
jemten
closed
1 year ago
0
increasing max retroseq run time to 15 h
#2041
jemten
closed
1 year ago
1
Release/11.2.2
#2040
jemten
closed
1 year ago
1
patching gens_preproc
#2039
jemten
closed
1 year ago
0
Sv updates
#2038
jemten
closed
1 year ago
1
Release/11.2.1
#2037
jemten
closed
1 year ago
1
patching gens pre-processing script
#2036
jemten
closed
1 year ago
0
merge Release/11.2.0 into develop
#2035
jemten
closed
1 year ago
1
updating expansionhunter database
#2034
jemten
closed
1 year ago
0
Release/11.2.0
#2033
jemten
closed
1 year ago
0
Me filter
#2032
jemten
closed
1 year ago
0
most severe consequence polypyrimidine stretch
#2031
dnil
opened
1 year ago
8
removed me exon annotation
#2030
jemten
closed
1 year ago
0
Vep me 2
#2029
jemten
closed
1 year ago
0
Vep me
#2028
jemten
closed
1 year ago
3
Missing or interrupted b-allele tracks for Gens
#2027
dnil
closed
1 year ago
10
Annotate me
#2026
jemten
closed
1 year ago
0
merge mobile element vcfs
#2025
jemten
closed
1 year ago
0
prepare bam files for retroseq
#2024
jemten
closed
1 year ago
0
adding retroseq
#2023
jemten
closed
1 year ago
0
Release/11.1.3
#2022
jemten
closed
1 year ago
0
Explanation called SNV - but not seen in IGV???
#2021
KickiLagerstedt
closed
1 year ago
13
Release/11.1.3
#2020
jemten
closed
1 year ago
0
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