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Add "Sequencing analysis" to placement map in step CG002 - Normalization of microbial samples for sequencing #448

Open idalindegaard opened 1 year ago

idalindegaard commented 1 year ago

Lims Issue

For definitions of headings below see Basic Concepts.

Work Flow: Microbial WGS v7 Protocol: CG002 - Normalization of microbial samples for sequencing v2 Step: CG002 - Normalization of microbial samples for sequencing

Description: We are pooling microbial finished libraries after the last normalization to make pipetting possible for the sequencing pooling. However, since we have two different kinds of apptags (VWxNXTR001 and MWxNXTR003) we need to make two pools.

It would be nice to see the Sequencing analysis udf in the placement map in this step to ease the pooling process.

Since the "make_96well_placement_map" script is general for many steps and we might not want the sequencing analysis udf always, maybe there can be an exception for this step?

idalindegaard commented 1 year ago

See comment section in this PR