Closed barrystokman closed 4 years ago
Derive basemask for regular novaseq demuxing and NIPT, respectively:
bash /home/hiseq.clinical/STAGE/SCRIPTS/git/demultiplexing/scripts/novaseq/checkfornewrun.bash /home/hiseq.clinical/STAGE/novaseq/runs/ /home/hiseq.clinical/STAGE/novaseq/demux/
This PR adds/fixes ...
How to prepare for test:
bash servers/resources/hasta.scilifelab.se/update-demux-stage.sh [THIS-BRANCH-NAME]
How to test:
bash /home/hiseq.clinical/STAGE/SCRIPTS/git/demultiplexing/scripts/novaseq/checkfornewrun.bash /home/hiseq.clinical/STAGE/novaseq/runs/ /home/hiseq.clinical/STAGE/novaseq/demux/
Expected test outcome:
Y51,I8,I8,Y51
Y51I8I8Y51
Review:
This version is a: