Closed barrystokman closed 3 years ago
scripts involved:
novaseq demux https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/novaseq/checkfornewrun.bash https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/novaseq/demux-novaseq.bash
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/novaseq/checkfornewrun.bash
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/novaseq/demux-novaseq.bash
2500 demux https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/checkfornewrun.bash https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/demux.bash
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/checkfornewrun.bash
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/demux.bash
delivery novaseq & 2500 results: https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/2-hiseq-deliver.bash
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/2-hiseq-deliver.bash
2500 NIPT: https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/syncnipt.bash
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/syncnipt.bash
NIPT viewer?:
Note: best to be picked up together with the crontab settings
@barrystokman Done?
Yes, closing.
scripts involved:
novaseq demux
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/novaseq/checkfornewrun.bash
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/novaseq/demux-novaseq.bash
2500 demux
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/checkfornewrun.bash
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/demux.bash
delivery novaseq & 2500 results:
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/2-hiseq-deliver.bash
2500 NIPT:
https://github.com/Clinical-Genomics/demultiplexing/blob/master/scripts/syncnipt.bash
NIPT viewer?:
Note: best to be picked up together with the crontab settings