This PR fixes so that correct enviroment variable is used when creating the sbatch job for hiseqx flowcells. In addition, it fixes the unbound variable that hindered demuxes to start
How to prepare for test:
[ ] ssh to hasta
[ ] install on stage:
bash servers/resources/hasta.scilifelab.se/update-demux-stage.sh [THIS-BRANCH-NAME]
How to test:
[ ] login to ...
[ ] do ...
Expected test outcome:
[ ] check that ...
[ ] Take a screenshot and attach or copy/paste the output.
Review:
[ ] code approved by
[ ] tests executed by
[ ] "Merge and deploy" approved by
Thanks for filling in who performed the code review and the test!
This PR fixes so that correct enviroment variable is used when creating the sbatch job for hiseqx flowcells. In addition, it fixes the unbound variable that hindered demuxes to start
How to prepare for test:
bash servers/resources/hasta.scilifelab.se/update-demux-stage.sh [THIS-BRANCH-NAME]
How to test:
Expected test outcome:
Review:
This version is a: