Closed ingkebil closed 5 years ago
Demux faster by using more cores!
How To test:
git clone -b more-cores https://github.com/clinical-genomics/demultiplexing ~/git/<yourname>/demultiplexing
bash ~/git/<yourname>/emux-novaseq.bash ~/STAGE/novaseq/runs/190129_A00689_0008_BHHGYWDSXX ~/STAGE/novaseq/demux/
Expected outcome:
~/STAGE/novaseq/demux/190129_A00689_0008_BHHGYWDSXX
Outcome:
... [20190415093351] Here we go! ... [20190415182509] cgstats select --project indexcheck
w00t w00t! It only took 9 hours!
Demux faster by using more cores!
How To test:
git clone -b more-cores https://github.com/clinical-genomics/demultiplexing ~/git/<yourname>/demultiplexingbash ~/git/<yourname>/emux-novaseq.bash ~/STAGE/novaseq/runs/190129_A00689_0008_BHHGYWDSXX ~/STAGE/novaseq/demux/Expected outcome:
~/STAGE/novaseq/demux/190129_A00689_0008_BHHGYWDSXXthe time should be less then 12 hoursOutcome:
w00t w00t! It only took 9 hours!