requirements: Set fixed version for deps - Githubissues

Clinical-Genomics / genmod

Annotate models of genetic inheritance patterns in variant files (vcf files)

http://Clinical-Genomics.github.io/genmod/

MIT License

78 stars 19 forks source link

requirements: Set fixed version for deps #109

Closed torbjorgen closed 1 year ago

torbjorgen commented 1 year ago

Make sure to lock down versions for deps, to avoid compatibility and runtime issues.

For the packages that does not specify a fixed version, upgrade to latest that does not fail unit tests.

Signed-off-by: Tor Björgen tor.bjorgen@scilifelab.se

This PR adds | fixes:

Runtime issues in Hasta where click arguments fails due to old version compared this branch.

How to prepare for test:

[ ] ssh to ...
[ ] Install on stage: bash servers/resources/SERVER.scilifelab.se/update-[THIS_TOOL]-stage.sh [THIS-BRANCH-NAME]

How to test:

-

Expected outcome:

[ ]

Review:

[ ] Code approved by
[ ] Tests executed by
[ ] "Merge and deploy" approved by

This version is a:

[ ] MAJOR - when you make incompatible API changes
[ ] MINOR - when you add functionality in a backwards compatible manner
[ ] PATCH - when you make backwards compatible bug fixes or documentation/instructions

torbjorgen commented 1 year ago

FYI this fix is needed to run #108 on Hasta