Unfreeze python version, fix collections import - Githubissues

Clinical-Genomics / genmod

Annotate models of genetic inheritance patterns in variant files (vcf files)

http://moonso.github.io/genmod/

MIT License

74 stars 18 forks source link

Unfreeze python version, fix collections import #125

Open dnil opened 7 months ago

dnil commented 7 months ago

This PR adds | fixes:

Lifts the restriction on python 3.8 by fixing the issue in #119

How to prepare for test:

[ ] ssh to ...
[ ] Install on stage: bash servers/resources/SERVER.scilifelab.se/update-[THIS_TOOL]-stage.sh [THIS-BRANCH-NAME]

How to test:

-

Expected outcome:

[ ] no crash on eg genmod annotate when installed with modern python

Review:

[ ] Code approved by
[ ] Tests executed by
[ ] "Merge and deploy" approved by

This version is a:

[ ] MAJOR - when you make incompatible API changes
[ ] MINOR - when you add functionality in a backwards compatible manner
[ ] PATCH - when you make backwards compatible bug fixes or documentation/instructions