Add support for IMPRECISE variants when querying a ref vcf

Clinical-Genomics / genmod

Annotate models of genetic inheritance patterns in variant files (vcf files)

http://Clinical-Genomics.github.io/genmod/

MIT License

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Open henrikstranneheim opened 8 years ago

henrikstranneheim commented 8 years ago

Enable support for both PRECISE and IMPRECISE when querying a reference vcf.

PRECISE use current algorithm
IMPRECISE use completely contained CIPOS and CIEND for query to identify a match within a SVTYPE.