Clinical-Genomics / hermes

Communication layer between CG and the pipelines.
https://clinical-genomics.github.io/hermes/
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adds tags for mobile elements #75

Closed jemten closed 1 year ago

jemten commented 1 year ago

Description

This PR adds tags for the files generated by the mobile element branch of the MIP DNA workflow

How to prepare for test

How to test

Expected test outcome

Review

This version is a

Implementation Plan

codecov-commenter commented 1 year ago

Codecov Report

Patch and project coverage have no change.

Comparison is base (75e29a0) 89.75% compared to head (85a8f10) 89.75%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #75 +/- ## ======================================= Coverage 89.75% 89.75% ======================================= Files 24 24 Lines 537 537 ======================================= Hits 482 482 Misses 55 55 ``` | Flag | Coverage Δ | | |---|---|---| | unittests | `89.75% <ø> (ø)` | | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics#carryforward-flags-in-the-pull-request-comment) to find out more. | [Impacted Files](https://codecov.io/gh/Clinical-Genomics/hermes/pull/75?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics) | Coverage Δ | | |---|---|---| | [cg\_hermes/config/mip\_dna.py](https://codecov.io/gh/Clinical-Genomics/hermes/pull/75?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics#diff-Y2dfaGVybWVzL2NvbmZpZy9taXBfZG5hLnB5) | `100.00% <ø> (ø)` | | | [cg\_hermes/config/tags.py](https://codecov.io/gh/Clinical-Genomics/hermes/pull/75?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics#diff-Y2dfaGVybWVzL2NvbmZpZy90YWdzLnB5) | `95.00% <ø> (ø)` | |

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jemten commented 1 year ago

stored in housekeeper ✔️

image
jemten commented 1 year ago

deployed on hasta

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