henrikstranneheim
commented
9 months ago Database π
[henrik.stranneheim@hasta:~] [S_base] 4s 2 $ housekeeper-test get bundle -v justhusky
2024-01-31 08:45:53 hasta.scilifelab.se housekeeper.cli.core[22788] INFO Use root path /home/proj/stage/housekeeper-bundles
π¦ Bundle table π¦
ββββββββ³ββββββββββββββ³ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ³βββββββββββββ
β ID β Bundle name β Version IDs β Created β
β‘ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ©
β 8925 β justhusky β 167748, 140963, 136933, 120104, 51171, 42582, 16939, 9523 β 2019-06-11 β
ββββββββ΄ββββββββββββββ΄ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ΄βββββββββββββ
π Version table π
ββββββββββ³ββββββββββββββ³βββββββββββ³βββββββββββββ³βββββββββββ³βββββββββββββ³ββββββββββ
β ID β Bundle name β Nr files β Included β Archived β Created β Expires β
β‘βββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ©
β 167748 β justhusky β 356 β 2023-12-07 β β 2023-12-07 β β
ββββββββββ΄ββββββββββββββ΄βββββββββββ΄βββββββββββββ΄βββββββββββ΄βββββββββββββ΄ββββββββββ
π Files table π
βββββββββββ³βββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ³ββββββββββββββββββββββββββββββββββββββββββββββββββββββ
β ID β File name β Tags β
β‘βββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ©
β 5060112 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md.cram β earlycasualcaiman, cram, scout β
β 5060113 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md.cram.crai β earlycasualcaiman, cram, scout β
β 5060114 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md.cram β hugelymodelbat, cram, scout β
β 5060115 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md.cram.crai β hugelymodelbat, cram, scout β
β 5060116 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md.cram β slowlycivilbuck, cram, scout β
β 5060117 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md.cram.crai β slowlycivilbuck, cram, scout β
β 5060118 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_sex.tsv β sex-check, earlycasualcaiman, chanjo, scout β
β 5060119 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_sex.tsv β sex-check, hugelymodelbat, chanjo, scout β
β 5060120 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_sex.tsv β sex-check, slowlycivilbuck, chanjo, scout β
β 5060121 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_subsample_MT.bam β bam-mt, earlycasualcaiman, scout β
β 5060122 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_subsample_MT.bam.bai β bam-mt, earlycasualcaiman, scout β
β 5060123 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_subsample_MT.bam β bam-mt, hugelymodelbat, scout β
β 5060124 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_subsample_MT.bam.bai β bam-mt, hugelymodelbat, scout β
β 5060125 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_subsample_MT.bam β bam-mt, slowlycivilbuck, scout β
β 5060126 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_subsample_MT.bam.bai β bam-mt, slowlycivilbuck, scout β
β 5060127 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov.bw β earlycasualcaiman, bigwig, tiddit-coverage, scout β
β 5060128 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov.bw β hugelymodelbat, bigwig, tiddit-coverage, scout β
β 5060129 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov.bw β slowlycivilbuck, bigwig, tiddit-coverage, scout β
β 5060130 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_1.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060131 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_2.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060132 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_3.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060133 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_4.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060134 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_5.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060135 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_6.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060136 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_7.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060137 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_8.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060138 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_9.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060139 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_10.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060140 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_11.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060141 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_12.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060142 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_13.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060143 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_14.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060144 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_15.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060145 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_16.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060146 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_17.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060147 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_18.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060148 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_19.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060149 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_20.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060150 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_21.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060151 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_22.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060152 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_X.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060153 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_tcov_Y.png β earlycasualcaiman, chromograph, tcov, scout β
β 5060154 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_1.png β hugelymodelbat, chromograph, tcov, scout β
β 5060155 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_2.png β hugelymodelbat, chromograph, tcov, scout β
β 5060156 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_3.png β hugelymodelbat, chromograph, tcov, scout β
β 5060157 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_4.png β hugelymodelbat, chromograph, tcov, scout β
β 5060158 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_5.png β hugelymodelbat, chromograph, tcov, scout β
β 5060159 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_6.png β hugelymodelbat, chromograph, tcov, scout β
β 5060160 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_7.png β hugelymodelbat, chromograph, tcov, scout β
β 5060161 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_8.png β hugelymodelbat, chromograph, tcov, scout β
β 5060162 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_9.png β hugelymodelbat, chromograph, tcov, scout β
β 5060163 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_10.png β hugelymodelbat, chromograph, tcov, scout β
β 5060164 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_11.png β hugelymodelbat, chromograph, tcov, scout β
β 5060165 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_12.png β hugelymodelbat, chromograph, tcov, scout β
β 5060166 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_13.png β hugelymodelbat, chromograph, tcov, scout β
β 5060167 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_14.png β hugelymodelbat, chromograph, tcov, scout β
β 5060168 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_15.png β hugelymodelbat, chromograph, tcov, scout β
β 5060169 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_16.png β hugelymodelbat, chromograph, tcov, scout β
β 5060170 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_17.png β hugelymodelbat, chromograph, tcov, scout β
β 5060171 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_18.png β hugelymodelbat, chromograph, tcov, scout β
β 5060172 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_19.png β hugelymodelbat, chromograph, tcov, scout β
β 5060173 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_20.png β hugelymodelbat, chromograph, tcov, scout β
β 5060174 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_21.png β hugelymodelbat, chromograph, tcov, scout β
β 5060175 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_22.png β hugelymodelbat, chromograph, tcov, scout β
β 5060176 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_X.png β hugelymodelbat, chromograph, tcov, scout β
β 5060177 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_tcov_Y.png β hugelymodelbat, chromograph, tcov, scout β
β 5060178 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_1.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060179 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_2.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060180 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_3.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060181 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_4.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060182 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_5.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060183 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_6.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060184 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_7.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060185 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_8.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060186 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_9.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060187 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_10.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060188 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_11.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060189 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_12.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060190 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_13.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060191 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_14.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060192 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_15.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060193 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_16.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060194 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_17.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060195 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_18.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060196 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_19.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060197 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_20.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060198 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_21.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060199 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_22.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060200 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_X.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060201 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_tcov_Y.png β slowlycivilbuck, chromograph, tcov, scout β
β 5060202 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_mitodel.txt β earlycasualcaiman, scout, mitodel β
β 5060203 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_mitodel.txt β hugelymodelbat, scout, mitodel β
β 5060204 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_mitodel.txt β slowlycivilbuck, scout, mitodel β
β 5060205 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/earlycasualcaiman_lanes_1_sorted_md_coverage.bed β coverage, earlycasualcaiman, chanjo, sambamba-depth β
β 5060206 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_lanes_1_sorted_md_coverage.bed β coverage, hugelymodelbat, chanjo, sambamba-depth β
β 5060207 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/slowlycivilbuck_lanes_1_sorted_md_coverage.bed β coverage, slowlycivilbuck, chanjo, sambamba-depth β
β 5060208 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_smn.tsv β smn-calling, scout, justhusky β
β 5060209 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_exphun.vcf.gz β vcf-str, scout, justhusky β
β 5060210 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_exphun.vcf.gz.csi β vcf-str, scout, justhusky β
β 5060211 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/grch37_expansionhunter_variant_catalog_-5.0.0-.json β expansionhunter, scout, justhusky, variant-catalog β
β 5060212 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_exphun_earlycasualcaiman.vcf β earlycasualcaiman, vcf-str, expansionhunter, scout β
β 5060213 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_exphun_earlycasualcaiman.bam β bam, earlycasualcaiman, expansionhunter, scout β
β 5060214 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_exphun_earlycasualcaiman.bam.bai β bam, earlycasualcaiman, expansionhunter, scout β
β 5060215 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_exphun_hugelymodelbat.vcf β hugelymodelbat, vcf-str, expansionhunter, scout β
β 5060216 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_exphun_hugelymodelbat.bam β bam, hugelymodelbat, expansionhunter, scout β
β 5060217 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_exphun_hugelymodelbat.bam.bai β bam, hugelymodelbat, expansionhunter, scout β
β 5060218 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_exphun_slowlycivilbuck.vcf β slowlycivilbuck, vcf-str, expansionhunter, scout β
β 5060219 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_exphun_slowlycivilbuck.bam β bam, slowlycivilbuck, expansionhunter, scout β
β 5060220 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_exphun_slowlycivilbuck.bam.bai β bam, slowlycivilbuck, expansionhunter, scout β
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β 5060222 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_comb.bcf.csi β sv-bcf, justhusky β
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β 5060228 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_cyto.hugelymodelbat.cgh β vcf2cytosure, hugelymodelbat, scout β
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β 5060255 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, rhocall-viz, scout β
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β 5060257 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.slowlycivilbuβ¦ β slowlycivilbuck, rhocall-viz, scout β
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β 5060260 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
β 5060261 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
β 5060262 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
β 5060263 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
β 5060264 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
β 5060265 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
β 5060266 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
β 5060267 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
β 5060268 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
β 5060269 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
β 5060270 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
β 5060271 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, fracsnp, scout β
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β 5060291 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, autozyg, scout β
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β 5060293 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, autozyg, scout β
β 5060294 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, autozyg, scout β
β 5060295 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, autozyg, scout β
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β 5060300 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, autozyg, scout β
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β 5060302 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, autozyg, scout β
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β 5060305 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.earlycasualcaβ¦ β earlycasualcaiman, chromograph, autozyg, scout β
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β 5060310 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
β 5060311 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
β 5060312 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
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β 5060315 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
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β 5060317 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
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β 5060319 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
β 5060320 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
β 5060321 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
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β 5060323 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
β 5060324 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
β 5060325 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
β 5060326 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
β 5060327 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_rhoviz.hugelymodelbaβ¦ β hugelymodelbat, chromograph, fracsnp, scout β
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β 5060438 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.regions_20.β¦ β hugelymodelbat, chromograph, upd, regions, scout β
β 5060439 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.sites_13.png β hugelymodelbat, chromograph, sites, upd, scout β
β 5060440 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.regions_11.β¦ β hugelymodelbat, chromograph, upd, regions, scout β
β 5060441 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.sites_20.png β hugelymodelbat, chromograph, sites, upd, scout β
β 5060442 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.regions_8.pβ¦ β hugelymodelbat, chromograph, upd, regions, scout β
β 5060443 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.sites_17.png β hugelymodelbat, chromograph, sites, upd, scout β
β 5060444 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.regions_15.β¦ β hugelymodelbat, chromograph, upd, regions, scout β
β 5060445 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.sites_8.png β hugelymodelbat, chromograph, sites, upd, scout β
β 5060446 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.regions_21.β¦ β hugelymodelbat, chromograph, upd, regions, scout β
β 5060447 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.sites_3.png β hugelymodelbat, chromograph, sites, upd, scout β
β 5060448 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.regions_10.β¦ β hugelymodelbat, chromograph, upd, regions, scout β
β 5060449 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.regions_17.β¦ β hugelymodelbat, chromograph, upd, regions, scout β
β 5060450 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.sites_19.png β hugelymodelbat, chromograph, sites, upd, scout β
β 5060451 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/hugelymodelbat_gatkcomb_rhocall_norm_af_upd.regions_14.β¦ β hugelymodelbat, chromograph, upd, regions, scout β
β 5060452 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_mt_frqf_cadd_vep_parβ¦ β vcf-snv-research, scout, justhusky β
β 5060453 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_mt_frqf_cadd_vep_parβ¦ β vcf-snv-research, scout, justhusky β
β 5060454 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_mt_frqf_cadd_vep_parβ¦ β vcf-snv-clinical, scout, justhusky β
β 5060455 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_gatkcomb_rhocall_norm_af_mt_frqf_cadd_vep_parβ¦ β vcf-snv-clinical, scout, justhusky β
β 5060456 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_metrics_deliverables.yaml β qc-metrics, justhusky, deliverable β
β 5060457 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_qc_metrics.yaml β qc-metrics, justhusky, audit β
β 5060458 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_vcol.yaml β exe-ver, justhusky β
β 5060459 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/multiqc_report.html β multiqc-html, scout, justhusky β
β 5060460 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/multiqc_data.json β multiqc-json, vogue, justhusky β
β 5060461 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/mip_2023-12-07T10:32:07.log β mip-log, justhusky β
β 5060462 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/reference_info.yaml β mip-analyse, reference-info, justhusky β
β 5060463 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_config.yaml β mip-config, justhusky β
β 5060464 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/mip12.0-dna.yaml β config, mip-analyse, justhusky β
β 5060465 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/pedigree.yaml β pedigree-yaml, justhusky β
β 5060466 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky.fam β pedigree, scout, justhusky β
β 5060467 β /home/proj/stage/housekeeper-bundles/justhusky/2023-12-07/justhusky_qc_sample_info.yaml β sample-info, justhusky β
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sonarcloud[bot]
Description
Added
-
Changed
Fixed
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Testing
How to prepare for test
Any migrations need to be applied manually with alembic against the stage database.
How to test
Expected test outcome
Review
This version is a: