Clinical-Genomics / microSALT

Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.
GNU General Public License v3.0
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Better support reruns #114

Closed sylvinite closed 1 year ago

sylvinite commented 3 years ago

It should be possible to re-analyse a single sample without trashing the entire previous analysis.

Also review whether it is necessary for the finish and report commands to contain a config.json.

pbiology commented 1 year ago

Works today. Might be a issue for JASEN