Closed talnor closed 3 years ago
Reference update successful on 2021-08-19:
INFO - Checking versions of references..
WARNING - Unable to find requested organism 'SARS-CoV-2' in pubMLST database
INFO - pubMLST reference for Enterococcus faecium updated to 2021-08-18 from 2021-08-16
INFO - Re-indexed contents of /home/proj/production/microbial/references/ST_loci/enterococcus_faecium
INFO - Cached resFinder database identical to remote.
INFO - Version check done. Creating sbatch jobs
Seems to have been a temporary issue. escherichia_coli also updated after this. Closing.
Describe the bug Error messages for external pubMLST references.
To Reproduce
Expected behavior The following error message appears when updating references:
WARNING - Unable to update pubMLST external data: HTTP Error 503: Service Unavailable
Screenshots
Software version (please complete the following information):
Additional context Updates at pubMLST. Seems to be affecting the updates of external pubMLST references.