Closed talnor closed 7 months ago
iirc there is also a way to auto-black using github actions. Might save some hassle in the future.
iirc there is also a way to auto-black using github actions. Might save some hassle in the future.
That would be super! I'll make an issue for that. We could add this to all the microbial workflows when we have figured out how to set it up.
Closing stale PR.
Description
The features of this PR primarily concerns end-users/bioinformaticians/internals
Summary of the changes made:
If not self-evident, mention what prompted the change.
Primary function of PR
Testing
If the update is a hotfix, it is sufficient to rely on the development testing along with the Travis self-test automatically applied to the PR.
Test routine to verify the stability of the PR:
bash /home/proj/production/servers/resources/hasta.scilifelab.se/update-microsalt-stage.sh update_PR_template
_us
source activate S_microSALT
_export MICROSALT_CONFIG=/home/proj/dropbox/microSALT.json
_microSALT analyse project MIC3109
microSALT analyse project MIC4107
microSALT analyse project MIC4109
microSALT analyse project ACC5551
_Verify that the results for projects MIC3109, MIC4107, MIC4109 & ACC5551 are consistent with the results attached to AMSystem doc 1490, MicrobialWGS.xlsx
Test results
These are the results of the tests, and necessary conclusions, that prove the stability of the PR.
Sign-offs