Clinical-Genomics / microSALT

Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.

GNU General Public License v3.0

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Added pytest and cleaned up example config #80

Closed sylvinite closed 4 years ago

sylvinite commented 4 years ago

Description

The features of this PR primarily concern internals.

It only adds a basic functional pytest and cleans up the example config.

Primary function of PR

[ ] Hotfix
[X] Patch
[ ] Minor functionality improvement
[ ] New type of analysis
[ ] Backward-breaking functionality improvement
[ ] This change requires internal documents to be updated
[ ] This change requires another repository to be updated

Testing

Testing is resolved exclusively through Travis-CI integration, since no existing python files are modified.

Sign-offs

[X] Code reviewed by @sylvinite
[X] Code tested by @sylvinite