Clinical-Genomics / microSALT

Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.

GNU General Public License v3.0

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Coverage improvement #89

Closed sylvinite closed 4 years ago

sylvinite commented 4 years ago

Description

The features of this PR primarily concerns internals

This PR consists of improvement to the testing from a CLI perspective, as well as minor changes in the code to support it.

Primary function of PR

[ ] Hotfix
[X] Patch
[ ] Minor functionality improvement
[ ] New type of analysis
[ ] Backward-breaking functionality improvement
[ ] This change requires internal documents to be updated
[ ] This change requires another repository to be updated

Testing

Testing is automatically resolved by having TravisCI successfully complete the self-test.

Sign-offs

[X] Code reviewed by @sylvinite
[X] Code tested by travisCI