Create major release v.2.0

[northwestwitch]

[2.0]

Added

• A new tsv_2_json endpoint to convert TSV files in json submission objects
• Keep a Changelog GitHub action
• Black GitHub action
• Flake8 Lint GitHub action
• Vulture GitHub action
• Woke GitHub action
• Badges showing the status of GitHub actions on README page
• File conversion endpoints accept optional parameters to set the following key/values: submissionName, clinvarSubmissionReleaseStatus, assertionCriteria

  Changed

• New API schema introduced on 2022-11-21
• Modified file parsing code to create submission jsons compliant with the new API
• Renamed the old demo CSV files to FILENAME_before_221121.csv
• Demo json submission file to include submissionName and clinvarSubmissionReleaseStatus key/values

  Fixed

• Do not crash when parsing Variant CSV files with no assertion criteria
• Simplify and fix CSV and TSV files parsing

This version is a:

• [x] MAJOR - when you make incompatible API changes
• [ ] MINOR - when you add functionality in a backwards compatible manner
• [ ] PATCH - when you make backwards compatible bug fixes or documentation/instructions

[codecov-commenter]

Codecov Report

Base: 95.65% // Head: 96.00% // Increases project coverage by +0.34% :tada:

Coverage data is based on head (fde232b) compared to base (f702aaf). Patch coverage: 100.00% of modified lines in pull request are covered.

Additional details and impacted files

```diff @@ Coverage Diff @@ ## main #64 +/- ## ========================================== + Coverage 95.65% 96.00% +0.34% ========================================== Files 9 9 Lines 299 325 +26 ========================================== + Hits 286 312 +26 Misses 13 13 ``` | Flag | Coverage Δ | | |---|---|---| | unittests | `96.00% <100.00%> (+0.34%)` | :arrow_up: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics#carryforward-flags-in-the-pull-request-comment) to find out more. | [Impacted Files](https://codecov.io/gh/Clinical-Genomics/preClinVar/pull/64?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics) | Coverage Δ | | |---|---|---| | [preClinVar/\_\_version\_\_.py](https://codecov.io/gh/Clinical-Genomics/preClinVar/pull/64/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics#diff-cHJlQ2xpblZhci9fX3ZlcnNpb25fXy5weQ==) | `100.00% <100.00%> (ø)` | | | [preClinVar/build.py](https://codecov.io/gh/Clinical-Genomics/preClinVar/pull/64/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics#diff-cHJlQ2xpblZhci9idWlsZC5weQ==) | `100.00% <100.00%> (ø)` | | | [preClinVar/main.py](https://codecov.io/gh/Clinical-Genomics/preClinVar/pull/64/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics#diff-cHJlQ2xpblZhci9tYWluLnB5) | `91.13% <100.00%> (+0.23%)` | :arrow_up: | | [tests/test\_main.py](https://codecov.io/gh/Clinical-Genomics/preClinVar/pull/64/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics#diff-dGVzdHMvdGVzdF9tYWluLnB5) | `100.00% <100.00%> (ø)` | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Clinical-Genomics)

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