Remove avatar

[henrikstranneheim]

Description

Added

-

Changed

• Remove Avatar from user table and code as it is not used

Fixed

-

How to prepare for test

• [ ] ssh to hasta (depending on type of change)
• [ ] activate stage: us
• [ ] request trailblazer-stage on hasta: paxa
• [ ] install on stage:

  bash /home/proj/production/servers/resources/hasta.scilifelab.se/update-tool-stage.sh -e S_trailblazer -t trailblazer -b remove-avatar -a

• [ ] ssh to clinical-db (depending on type of change)
• [ ] install on stage: bash /home/proj/production/servers/resources/clinical-db.scilifelab.se/update-trailblazer-ui-stage.sh [THIS-BRANCH-NAME]

How to test

• [ ] login to ...
• [ ] do ...

Expected test outcome

• [ ] check that ...
• [ ] Take a screenshot and attach or copy/paste the output.

Review

• [ ] tests executed by
• [ ] "Merge and deploy" approved by Thanks for filling in who performed the code review and the test!

This version is a

• [ ] MAJOR - when you make incompatible API changes
• [ ] MINOR - when you add functionality in a backwards compatible manner
• [x] PATCH - when you make backwards compatible bug fixes or documentation/instructions

[henrikstranneheim]

CLI and API 👍

θ60° [henrik.stranneheim@hasta:~] [S_base] 2m47s $ trailblazer scan
Error updating analysis for: case - grandaphid : [Errno 13] Permission denied: '/home/proj/production/cancer/cases/grandaphid/analysis/slurm_jobids.yaml'
Error updating analysis for: case - goodbengal : [Errno 2] No such file or directory: '/home/proj/production/nipt/cases/goodbengal/output/sacct/submitted_jobs.yaml'
Error updating analysis for: case - helpedlab : [Errno 2] No such file or directory: '/home/proj/production/nipt/cases/helpedlab/output/sacct/submitted_jobs.yaml'
Error updating analysis for: case - newgopher : [Errno 13] Permission denied: '/home/proj/production/microbial/results/reports/trailblazer/ACC9662_slurm_ids.yaml'
Error updating analysis for: case - onestag : [Errno 13] Permission denied: '/home/proj/production/microbial/results/reports/trailblazer/ACC9966_slurm_ids.yaml'
Error updating analysis for: case - funnyaphid : [Errno 2] No such file or directory: '/home/proj/production/mutant/cases/funnyaphid/results/trailblazer_config.yaml'
Error updating analysis for: case - proudfish : [Errno 13] Permission denied: '/home/proj/production/microbial/results/reports/trailblazer/ACC9337_slurm_ids.yaml'
Error updating analysis for: case - setcolt : [Errno 13] Permission denied: '/home/proj/production/microbial/results/reports/trailblazer/ACC9963_slurm_ids.yaml'
Error updating analysis for: case - handyshrimp : [Errno 2] No such file or directory: '/home/proj/production/mutant/cases/handyshrimp/results/trailblazer_config.yaml'
Error updating analysis for: case - divinetomcat : [Errno 13] Permission denied: '/home/proj/production/microbial/results/reports/trailblazer/ACC5119_slurm_ids.yaml'
Error updating analysis for: case - HW2V2DRX2 : [Errno 2] No such file or directory: '/home/proj/production/flowcells/novaseq/runs/230504_A00689_0805_AHW2V2DRX2/slurm_job_ids.yaml'
Error updating analysis for: case - savingstag : [Errno 2] No such file or directory: '/home/proj/production/mutant/cases/savingstag/results/trailblazer_config.yaml'
Error updating analysis for: case - topewe : [Errno 13] Permission denied: '/home/proj/production/microbial/results/reports/trailblazer/ACC12566_slurm_ids.yaml'
Error updating analysis for: case - fullgoat : [Errno 13] Permission denied: '/home/proj/production/microbial/results/reports/trailblazer/ACC12567_slurm_ids.yaml'
Status in Tower: coolkodiak - 282044 - WPjrjs23yxQwq
Error logging case - coolkodiak :  JSONDecodeError
Updated status wondrousbaboon - 287260: failed
Updated status upkangaroo - 287264: completed
Updated status balancedjackass - 287373: completed
Updated status trustingviper - 287374: completed
Updated status factualsilkworm - 287375: completed
Updated status drivingbedbug - 287376: completed
Updated status directpika - 287378: completed
Updated status workingpython - 287380: completed
Status in Tower: harmlessglider - 287387 - 40stB3IsypVWov
Error logging case - harmlessglider :  JSONDecodeError
Status in Tower: adaptingvervet - 287388 - 3NcuEyaWfTxaLY
Error logging case - adaptingvervet :  JSONDecodeError
Status in Tower: helpingox - 287389 - 18MLl0Me3WREgi
Error logging case - helpingox :  JSONDecodeError
Status in Tower: workableoarfish - 287390 - 37sDYfoMlWiVt
Error logging case - workableoarfish :  JSONDecodeError
Status in Tower: stirreddragon - 287391 - 58FxBODijVbbb2
Error logging case - stirreddragon :  JSONDecodeError
Status in Tower: steadygoose - 287392 - 1q33XhNRVm6ZQ
Error logging case - steadygoose :  JSONDecodeError
Status in Tower: alertparakeet - 287393 - 1XzACZoQkwShgC
Error logging case - alertparakeet :  JSONDecodeError
Updated status cunningwalrus - 287401: running
Updated status winningpig - 287402: running
All analyses updated!

[sonarcloud[bot]]

Quality Gate passed

Kudos, no new issues were introduced!

0 New issues
0 Security Hotspots
No data about Coverage
0.0% Duplication on New Code

See analysis details on SonarCloud

[henrikstranneheim]

Deployed to production:

Log deploy... done.
trailblazer, version 20.2.4

[henrikstranneheim]

Looks good 👍 But what was the avatar?

It was a failed rouge project by a former colleague.