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Cloufield / gwaslab

A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/
GNU General Public License v3.0
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recombination data for hg38 is in the wrong format #44

Closed edg1983 closed 1 year ago

edg1983 commented 1 year ago

Hello,

I've downloaded recombination reference data for both hg19 and hg38 using your download_ref command.

However, it seems that the hg38 version recombination_hg38.tar.gz it's not an actual .gz file but a plain tar archive.

Indeed, extracting with tar -zxvf failed with the error gzip: stdin: not in gzip format, while tar -xvf works fine.

Cloufield commented 1 year ago

Hi, Thanks a lot for pointing this out. I might mistakenly rename the tar file to tar.gz. Just gzipped the source tar file and it should be fine now.

edg1983 commented 1 year ago

Confirmed! It works as an actual .tar.gz now.

Thanks for the rapid fix!