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Cloufield / gwaslab

A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/
GNU General Public License v3.0
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installation #82

Open YijiaWu1 opened 6 months ago

YijiaWu1 commented 6 months ago

Hi,

I always have problem in installing the package. I attached the error message.

Screenshot 2024-03-17 at 11 43 45 PM
Cloufield commented 6 months ago

Hi, I guess I might need more information to troubleshoot here. Would you please share the version of python, gwsalab and which devide you are using?

YijiaWu1 commented 6 months ago

the version of python is 3.11.0. I tried to do create the python3.9 environment as suggested (conda env create -n gwaslab_test -c conda-forge python=3.9), but failed. the version of gwaslab I tried to installed is 3.4.41. My device is Macbook pro M2. Thanks

Cloufield commented 6 months ago

Thanks! I think I may have seen a similar error before. It is probably caused by the limited compatibility support of Apple M chips. Would you please also show the full error message (which package caused the error)? I also prepared a DOCKER file for gwaslab that you can use to build images and use it as containers.