Issue on QQ plot visualization alone

Youpu-Chen commented 2 months ago

Hi there.

Thank you for developing this great tool! I've encountered a problem when trying to visualize the QQ plot alone. It report:

AttributeError: 'NoneType' object has no attribute 'get_xlim'

All the pkgs I imported were:

import gwaslab as gl
import matplotlib.pyplot as plt

from matplotlib import rcParams
rcParams["font.family"] = "Arial"

The code snippet to plot:

mysumstats.plot_mqq(mode="qq", 
                    # fig_args = {"figsize":(6,6)}, 
                    check=False, 
                    verbose=False)

The file format is PLINK 2.0.

I'll really appreciate it if you could give me a hint.

Cloufield commented 2 months ago

Hi Youpu, Sorry for the bug. Actually, I have already fixed it in this commit. Please try using the latest version ( pip install gwaslab==3.4.43 ). Thanks!

Youpu-Chen commented 2 months ago

The problem was solved, Thank you!

Cloufield / gwaslab

Issue on QQ plot visualization alone #90