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CoBrALab / RABIES

fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/en/stable/
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Integrate Bruker to BIDS converter #368

Open Gab-D-G opened 4 months ago

Gab-D-G commented 4 months ago

Create a wrapper around BrkRaw https://brkraw.github.io/ to allow for the conversion of Bruker raw files into the BIDS format directly within RABIES, avoiding the need for users to manually handle separate dependencies.

gdevenyi commented 4 months ago

This is a very big job. Proper BIDS conversion requires intimate knowledge of the dataset so you may have to reproduce most of the interfaces here.

I instead suggest contributing improvements to the install/documentation/features of brkraw.

gdevenyi commented 4 months ago

Let's keep RABIES focused at what it does best.