search

CoBrALab / antsRegistration-MAGeT

A reimplementation of MAGeTbrain using only ANTs tools.
Other
16 stars 6 forks source link

Investigate/Document how to cheat with scinet backfill #56

Closed gdevenyi closed 8 years ago

gdevenyi commented 8 years ago

New qbatch submits jobs which are considered 'large' by scinet.

With careful splitting we should be able to cheat the backfill algorithm.

This might be array jobs fault.

gdevenyi commented 8 years ago

Does setting individual jobs on qbatch avoid this?

gdevenyi commented 8 years ago

Submitting individual jobs definitely allows backfill cheating.

We need a way to detect available backfill space and cheat our way in.

Something like a "grouping" option to adjust CHUNKSIZE + a script to parse backfill and suggest an appropriate option?

gdevenyi commented 8 years ago

Scinet is all weird, who knows how backfill works. Not worth wasting time on.