search

CoBrALab / antsRegistration-MAGeT

A reimplementation of MAGeTbrain using only ANTs tools.
Other
16 stars 6 forks source link

Fix variable names in stage_multiatlas_vote of stages.sh #83

Closed cbedetti closed 7 years ago

cbedetti commented 7 years ago

Fix issue #82

gdevenyi commented 7 years ago

Did this actually fix it? :)

cbedetti commented 7 years ago

Yes, it worked with on my data of the issue. I even tested with a fresh input directory. Jobs were correctly submitted. I could wait for them to finish if you want.

gdevenyi commented 7 years ago

Please report back when things finish up :+1:

gdevenyi commented 7 years ago

Did this change fix your run?

cbedetti commented 7 years ago

I have relaunch some test. All register_atlas_template worked, the last one ran on Thursday 15th. Since then, this is the status on scinet:

gpc-sched-ib0: 
                                                                                  Req'd    Req'd       Elap
Job ID                  Username    Queue    Jobname          SessID  NDS   TSK   Memory   Time    S   Time
----------------------- ----------- -------- ---------------- ------ ----- ------ ------ --------- - ---------
42797554.gpc-sched-ib0  cbedetti    batch_ib T2017-06-14_14-5    --      1      8    --   04:00:00 Q       -- 
42797555.gpc-sched-ib0  cbedetti    batch_ib T2017-06-14_14-5    --      1      8    --   04:00:00 H       --