CoBrALab / optimized_antsMultivariateTemplateConstruction

A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support
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Implement Common (reference) space resampling #41

Open gdevenyi opened 2 years ago

gdevenyi commented 2 years ago

Need to be able to automatically generate transforms to a reference space if provided and produce DBM outputs in that space.

Q: does it happen in model and dbm, or just dbm?

gdevenyi commented 2 years ago

This should go in the DBM part, since the base modelbuilding code should be strictly limited to just modelbuilding.

gdevenyi commented 2 years ago

I now think this should go in the modelbuilding section because this may be needed by users to move subject-level measures to common space.

gdevenyi commented 1 year ago

Should we include some kind of handling of label files if provided?

Edit: maybe a seperate label propagation script.

gdevenyi commented 1 year ago

Resample input subjects into template space.

gdevenyi commented 1 year ago