Closed bcdarwin closed 5 years ago
Jumping in on this issue. My suggestion here is to refactor so that _setupVars()
does not force an exit if the required binaries for the queuing system aren't found. Instead, this check should be a preflight check only, right before jobs are launched at the bottom of qbatchDriver()
@pipitone agree, that's exactly where the problem lies :+1:
seems similar to https://github.com/Mouse-Imaging-Centre/pydpiper/issues/147 ... :)