Closed gdevenyi closed 4 years ago
Implement container mode, which generates a "meta" file, and a bare "joblist" file.
The idea is that a qbatch instance outside the container can monitor a directory for generation of such files, and do
qbatch $(cat jobname.metafile) jobname.joblist
qbatch does not handle properly wrapping the call to run the command inside the container, however the --header and --footer options can handle this, one such example: https://github.com/CoBrALab/antsRegistration-MAGeT/blob/container/bin/mb-container.sh
Implement container mode, which generates a "meta" file, and a bare "joblist" file.
The idea is that a qbatch instance outside the container can monitor a directory for generation of such files, and do
qbatch does not handle properly wrapping the call to run the command inside the container, however the --header and --footer options can handle this, one such example: https://github.com/CoBrALab/antsRegistration-MAGeT/blob/container/bin/mb-container.sh