Is it possible to change log_ratio_bin_size

CollasLab / edd

Enriched Domain Detector for ChIP-seq data

https://pypi.python.org/pypi/edd

MIT License

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Is it possible to change log_ratio_bin_size #18

Open FatihSarigol opened 3 years ago

FatihSarigol commented 3 years ago

Hello, I need to calculate log ratios in 10 bp sliding windows but EDD calculates them in 10 kbp. I see no option to change this bin size in settings but is there actually another way to make it happen? Thanks

rabdill commented 2 years ago

In case anyone is still struggling with this, the option to change this is in the config file—in the example file given, it's the very last line. The readme includes instructions on how to pass the config file as a parameter.