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CollasLab / edd

Enriched Domain Detector for ChIP-seq data
https://pypi.python.org/pypi/edd
MIT License
16 stars 4 forks source link

Add edd to bioconda? #8

Closed endrebak closed 7 years ago

endrebak commented 7 years ago

This would greatly simplify the installation. I made a few stabs at it, but was unable to get it to work:

https://travis-ci.org/bioconda/bioconda-recipes/builds/266776185

dpryan79 commented 7 years ago

I've just added a recipe for release 1.1.18 to bioconda.

endrebak commented 7 years ago

Nice job! I'll try reading your recipe to understand where I went wrong.

dpryan79 commented 7 years ago

@endrebak I expect you were only missing this tweak (and that one of the tests returns a non-zero status on success).

eivindgl commented 7 years ago

Good work @endrebak and @dpryan79 I had no idea that bioconda was a language agnostic package manager. It seems very useful!

FatihSarigol commented 3 years ago

Thanks guys for the conda build, but the current 1.1.19 version does not work, the similar error happens which was already posted: https://github.com/CollasLab/edd/issues/12

htslib needs to be downgraded to this version so that it can be wrapped by pysam properly:

conda install htslib=1.3.2