RE.run_exp takes path from main and calls read_file() a global function residing in RE.
read_file returns a string object of the file in csv format to RE.runexp
runexp calls seqgroups.create_groups, which creates groups and populates self.seq_list[] with SB objects(construct+set). create_groups returns a copy of that list to runexp.
run exp loops through the group list. for each group, another loop call bias_finder which should handle updating params in each seq_bias.
RE outputs a file w/ all inputted info plus new info as csv
ColtonGarelli
commented
6 years ago
RE.run_exp takes path from main and calls read_file() a global function residing in RE.
read_file returns a string object of the file in csv format to RE.runexp
runexp calls seqgroups.create_groups, which creates groups and populates self.seq_list[] with SB objects(construct+set). create_groups returns a copy of that list to runexp.
run exp loops through the group list. for each group, another loop call bias_finder which should handle updating params in each seq_bias.
RE outputs a file w/ all inputted info plus new info as csv