Dozens of Ketcher2 error messages

[martin-held-hereon]

• I am an ELNer
• I am a system/ELN admin

Expected Behavior

No Ketcher2 error messages

Current Behavior

Ketcher 2 editor (ketchersvc) throws dozens of error messages (~40). After removing all of them, one can use the sample and edit the molecular structure:

Failure Information

1) Error messages appear with Chemotion 1.9.2 (Hereon instance) and 1.9.3 (KIT-hosted instance for Hereon). Since it happens on 2 different instances, it’s not related to the specific instance or our Kubernetes container orchestration 2) We tested Ketcher 1.9.2 and 1.8.2. on the Chemotion 1.9.2 Hereon instance. Same problem, so it’s not Ketcher. 3) When turning Ketcher 2 off, the problem disappears, regardless of the instance. So it is merely Ketcher 2 that causes the error messages.

Steps to Reproduce

Open any sample.

[FabianMauz]

Hi @martin-held-hereon . I could reproduce the problem at our testing instance. We will have a look into this. Thanks for reporting and have a nice day

[PiTrem]

Hi @martin-held-hereon

• the KIT provided instance is fixed (@harivyasi )

• there is a typo in the config/structure_editors.yml.example: In a correct config/structure_editors.yml file, the key that defines the assets path for the editor is extSrc as described properly in the docs However in the config/structure_editors.yml.example the key currently set is extJs which is wrong. Is this file is copied as it is to structure_editors.yml, as it seems to be the case in the current eln docker image, then the configuration is incorrect. The structure_editors.yml can be corrected in the app volume, or overwritten using the shared/pullin directory.

(Also for the editor to load, the editor files should be present at the designated location. we currently do not ship with ketcher2 but that will change)

[martin-held-hereon]

We did the manual fix and that solved the issue. Thanks!