CommonCoreOntology / CommonCoreOntologies

The Common Core Ontology Repository holds the current released version of the Common Core Ontology suite.
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Determine overlaps with OBO #50

Closed cmungall closed 3 months ago

cmungall commented 5 years ago
  1. Figure out how much overlap there is between CCO and OBO (either OBO-Core or specific domain ontologies)
  2. Come up with a strategy: equivalence axioms vs ceding by one side

cmungall commented 5 years ago

following are automated and include obvious false positives

IAO

IAO IAO label CCO CCO label
IAO:0000013 journal article CCO:JournalArticle Journal Article
IAO:0000030 information content entity CCO:InformationContentEntity Information Content Entity
IAO:0000064 algorithm CCO:Algorithm Algorithm
IAO:0000088 report CCO:Report Report
IAO:0000101 image CCO:Image Image
IAO:0000112 example of usage CCO:example_of_usage example of usage
IAO:0000115 definition CCO:definition definition
IAO:0000117 term editor CCO:term_editor term editor
IAO:0000119 definition source CCO:definition_source definition source
IAO:0000132 lot number CCO:LotNumber Lot Number
IAO:0000136 is about CCO:ModalRelationOntology/is_about is about
IAO:0000136 is about CCO:is_about is about
IAO:0000310 document CCO:Document Document
IAO:0000600 elucidation CCO:elucidation elucidation

OBI

OBI OBI label CCO CCO Label
OBI:0000245 organization CCO:Organization Organization
OBI:0000260 plan CCO:PlanSpecification Plan
OBI:0000753 Waters CHEBI:15377 water
OBI:0000844 hospital CCO:Hospital Hospital
OBI:0000940 optical microscope CCO:OpticalMicroscope Optical Microscope
OBI:0000967 container CCO:Container Container
OBI:0000990 electron microscope CCO:ElectronMicroscope Electron Microscope
OBI:0400022 Cyan CCO:Cyan Cyan
OBI:0400064 laser CCO:Laser Laser
OBI:0400107 computer CCO:Computer Computer
OBI:0400169 microscope CCO:Microscope Microscope

PATO

CCO CCO Label OBO OBO label
CCO:Acceleration Acceleration PATO:0001028 acceleration
CCO:Albedo Albedo PATO:0001295 albedo
CCO:Amount Amount PATO:0000070 amount
CCO:Amplitude Amplitude PATO:0000080 amplitude
CCO:AngularVelocity Angular Velocity PATO:0001413 angular velocity
CCO:Bent Bent PATO:0000617 bent
CCO:BiologicalSex Biological Sex PATO:0000047 biological sex
CCO:Black Black PATO:0000317 black
CCO:Blond Blond PATO:0001264 light yellow
CCO:Blue Blue PATO:0000318 blue
CCO:Blunt Blunt PATO:0001950 blunt
CCO:Bow Bow PATO:0000406 curved
CCO:Branched Branched PATO:0000402 branched
CCO:Brown Brown PATO:0000952 brown
CCO:Circumference Circumference PATO:0001648 circumference
CCO:Closure Closure PATO:0000136 closure
CCO:Coiled Coiled PATO:0000404 coiled
CCO:Color Color PATO:0000014 color
CCO:ColorBrightness Color Brightness PATO:0000016 color brightness
CCO:ColorHue Color Hue PATO:0000015 color hue
CCO:ColorSaturation Color Saturation PATO:0000017 color saturation
CCO:Combustion Combustion PATO:0015021 combustibility
CCO:Cuboidal Cuboidal PATO:0001872 cuboid
CCO:Cyan Cyan PATO:0000319 cyan
CCO:Cylindrical Cylindrical PATO:0001873 cylindrical
CCO:Density Mass Density PATO:0001019 mass density
CCO:Depth Depth PATO:0001595 depth
CCO:Diameter Diameter PATO:0001334 diameter
CCO:Drooping Drooping PATO:0002165 drooping
CCO:Fatigability Fatigability PATO:0001815 fatigability
CCO:Flat Flat PATO:0000407 flat
CCO:Fluorescence Fluorescence PATO:0000018 fluorescence
CCO:Folded Folded PATO:0001910 folded
CCO:Force Force PATO:0001035 force
CCO:Frequency Frequency PATO:0000044 frequency
CCO:Green Green PATO:0000320 green
CCO:Grey Grey PATO:0000950 grey
CCO:Hardness Hardness PATO:0000048 hardness
CCO:Height Height PATO:0000119 height
CCO:HighFrequency High Frequency PATO:0000380 increased frequency
CCO:Initialism Initialism PATO:0002325 onset quality
CCO:Length Length PATO:0000122 length
CCO:Loudness Loudness PATO:0001521 sound amplitude
CCO:LowFrequency Low Frequency PATO:0000381 decreased frequency
CCO:Magenta Magenta PATO:0000321 magenta
CCO:Magnetic Magnetism PATO:0001682 magnetism
CCO:Maroon Maroon PATO:0001426 maroon
CCO:Mass Mass PATO:0000125 mass
CCO:ModalRelationOntology/asWKT as WKT http://www.opengis.net/ont/geosparql#asWKT as WKT
CCO:ModalRelationOntology/has_part has_part BFO:0000051 has_part
CCO:ModalRelationOntology/part_of part_of BFO:0000050 part_of
CCO:ModalRelationOntology/precedes precedes PATO:0001632 anterior to
CCO:Momentum Momentum PATO:0001023 momentum
CCO:Oblong Oblong PATO:0000946 oblong
CCO:Opacity Opacity PATO:0000957 opacity
CCO:Opaque Opaque PATO:0000963 opaque
CCO:Orange Orange PATO:0000953 orange
CCO:Organization Organization PATO:0000938 organized
CCO:Perimeter Perimeter PATO:0001711 perimeter
CCO:Phosphorescence Phosphorescence PATO:0001298 phosphorescence
CCO:Power Power PATO:0001024 power
CCO:Pressure Pressure PATO:0001025 pressure
CCO:Protruding Protruding PATO:0001598 protruding
CCO:Purple Purple PATO:0000951 purple
CCO:Pyramidal Pyramidal PATO:0002336 pyramidal
CCO:Radioactive Radioactive PATO:0001740 activity (of a radionuclide)
CCO:Radiopacity Radiopacity PATO:0002136 radiopacity
CCO:Radiopaque Radiopaque PATO:0002137 radiopaque
CCO:Rectangular Rectangular PATO:0001867 rectangular
CCO:Red Red PATO:0000322 red
CCO:Refractivity Refractivity PATO:0001372 refractivity
CCO:Rosy Rosy PATO:0001425 rosy
CCO:Round Round PATO:0000411 circular
CCO:Scar Scar PATO:0001850 scarred
CCO:Semicircular Semicircular PATO:0002232 semicircular
CCO:Serrated Serrated PATO:0001206 serrated
CCO:Sharp Sharp PATO:0000944 sharpness
CCO:Sloped Sloped PATO:0001481 sloped
CCO:SoundFrequency Sound Frequency PATO:0001520 sound frequency
CCO:SoundWavelength Sound Wavelength PATO:0001523 sound wavelength
CCO:Speed Speed PATO:0000008 speed
CCO:Spherical Spherical PATO:0001499 spherical
CCO:Split Split PATO:0001444 broken
CCO:Square Square PATO:0000413 square
CCO:Straight Straight PATO:0002180 straight
CCO:Strength Strength PATO:0001230 strength
CCO:SurfaceTension Surface Tension PATO:0001461 surface tension
CCO:Telescope Telescope PATO:0002313 telescopic
CCO:Temperature Temperature PATO:0000146 temperature
CCO:Texture Texture PATO:0000150 texture
CCO:Thickness Thickness PATO:0000591 increased thickness
CCO:Thin Thin PATO:0000592 decreased thickness
CCO:Translucent Translucent PATO:0001354 translucent
CCO:Transparent Transparent PATO:0000964 transparent
CCO:Triangular Triangular PATO:0001875 triangular
CCO:Tripod Tripod PATO:0002428 tripodal
CCO:Velocity Velocity PATO:0002242 velocity
CCO:Vermilion Vermilion PATO:0001302 vermilion
CCO:Violet Violet PATO:0001424 violet
CCO:Wavelength Wavelength PATO:0001242 wavelength
CCO:Wavy Wavy PATO:0000967 undulate
CCO:Weight Weight PATO:0000128 weight
CCO:Wetness Wetness PATO:0001822 wetness
CCO:White White PATO:0000323 white
CCO:Wide Wide PATO:0000600 increased width
CCO:Width Width PATO:0000921 width
CCO:Yellow Yellow PATO:0000324 yellow
CCO:definition definition IAO:0000115 definition

ENVO

ENVO ENVO label CCO CCO label
ENVO:00000000 geographic feature CCO:GeographicFeature Geographic Feature
ENVO:00000005 first-order administrative region CCO:FirstOrderAdministrativeRegion First-Order Administrative Region
ENVO:00000006 second-order administrative region CCO:SecondOrderAdministrativeRegion Second-Order Administrative Region
ENVO:00000007 third-order administrative region CCO:ThirdOrderAdministrativeRegion Third-Order Administrative Region
ENVO:00000008 fourth-order administrative region CCO:FourthOrderAdministrativeRegion Fourth-Order Administrative Region
ENVO:00000009 national geopolitical entity CCO:Country Country
ENVO:00000011 garden CCO:Park Park
ENVO:00000012 hydrographic feature CCO:HydrographicFeature Hydrographic Feature
ENVO:00000014 canal CCO:Canal Canal
ENVO:00000025 reservoir CCO:Reservoir Reservoir
ENVO:00000029 watercourse CCO:Branched Branched
ENVO:00000040 waterfall CCO:Force Force
ENVO:00000062 populated place CCO:PopulatedPlace Populated place
ENVO:00000064 road CCO:Highway Highway
ENVO:00000065 railway CCO:Railway Railway
ENVO:00000066 man-made tunnel CCO:Tunnel Tunnel
ENVO:00000070 construction CCO:ConstructedFeature Constructed Feature
ENVO:00000074 dam CCO:Dam Dam
ENVO:00000075 bridge CCO:Bridge Bridge
ENVO:00000076 mine CCO:Mine Mine
ENVO:00000077 agricultural feature CCO:AgriculturalFacility Agricultural Facility
ENVO:00000078 farm CCO:Farm Farm
ENVO:00000087 cliff CCO:Scar Scar
ENVO:00000101 delta CCO:Fan Fan
ENVO:00000104 undersea feature CCO:Flat Flat
ENVO:00000122 track CCO:Trail Trail
ENVO:00000158 causeway CCO:Road Road
ENVO:00000191 solid astronomical body part CCO:PhysiographicFeature Physiographic Feature
ENVO:00000533 landfill CCO:Landfill Landfill
ENVO:00000563 pier CCO:Pier Pier
ENVO:00000856 city CCO:City City
ENVO:00002000 slope CCO:Sloped Sloped
ENVO:00002173 hospital CCO:Hospital Hospital
ENVO:00002221 shop CCO:Shop Shop
ENVO:00002271 nuclear power plant CCO:NuclearPowerPlant Nuclear Power Plant
ENVO:00002297 environmental feature CCO:EnvironmentalFeature Environmental Feature
ENVO:00002874 air conditioning unit CCO:AirConditioningUnit Air Conditioning Unit
ENVO:00003963 warehouse CCO:Warehouse Warehouse
ENVO:01000162 organ CCO:Organization Organization
ENVO:01000417 house CCO:House House
ENVO:01000460 asphalt CCO:Pitch Pitch
ENVO:01000536 factory CCO:Factory Factory
ENVO:01000577 radio device CCO:RadioReceiver Radio Receiver
ENVO:01000580 telephone CCO:Telephone Telephone
ENVO:01000582 landline telephone CCO:LandlineTelephone Landline Telephone
ENVO:01000602 truck CCO:Truck Truck
ENVO:01000604 vehicle CCO:Vehicle Vehicle
ENVO:01000610 motor CCO:Engine Engine
ENVO:01000611 bus CCO:Bus Bus
ENVO:01000613 watercraft CCO:Watercraft Watercraft
ENVO:01000614 bicycle CCO:Bicycle Bicycle
ENVO:01000615 motorcycle CCO:Motorcycle Motorcycle
ENVO:01000733 stock CCO:Stock Stock
ENVO:01000773 village CCO:Village Village
ENVO:01000779 public infrastructure CCO:Infrastructure Infrastructure
ENVO:01000984 grocery store CCO:GroceryStore Grocery Store
ENVO:01001221 office building CCO:OfficeBuilding Office Building
ENVO:01001488 aircraft CCO:Aircraft Aircraft
ENVO:2000037 fossil fuel power plant CCO:FossilFuelPowerPlant Fossil Fuel Power Plant