When giving the get_augustus_species.py script either the genus of my genome or the closest Augustus model nothing gets downloaded and i get this as output:
get_augustus_species.py --genus_name termitomyces --email_address <some_email>
Validating input genus name...
===
Taxon: termitomyces
Rank: genus
Lineage: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Lyophyllaceae
===
Suggestions:
We found them in order level: Agaricales
coprinus_cinereus
laccaria_bicolor
That's expected behavior!! It doesn't download anything but suggests which Augustus parameter you will use.
So you will put either "coprinus_cinereus" or "laccaria_bicolor" in your parameter.
When giving the
get_augustus_species.py
script either the genus of my genome or the closest Augustus model nothing gets downloaded and i get this as output:Am I doing something wrong here?