I have done a 3-way genome alignment like so, which has generated a .hal file. What is a good way to visualize these alignments for comparative purposes?
singularity run docker://quay.io/comparative-genomics-toolkit/cactus:v2.0.3 cactus jobStore_Test cactus_config.txt Test.hal --binariesMode local
Hello,
I have done a 3-way genome alignment like so, which has generated a .hal file. What is a good way to visualize these alignments for comparative purposes?
singularity run docker://quay.io/comparative-genomics-toolkit/cactus:v2.0.3 cactus jobStore_Test cactus_config.txt Test.hal --binariesMode local