ComparativeGenomicsToolkit / cactus

Official home of genome aligner based upon notion of Cactus graphs
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ignore numeric and duplicate ancestor labels #1109

Closed glennhickey closed 1 year ago

glennhickey commented 1 year ago

It's come up a few times that weird ancestor names in the input tree lead to very cryptic crashes late in the pipeline. This PR adds a check to clean out any numeric names (which tend to be bootstrap or other kinds of confidence scores from phylogeny progreams) or duplicate names with a warning.

Resolves #1107