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ComparativeGenomicsToolkit / cactus

Official home of genome aligner based upon notion of Cactus graphs
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msa_view seems to be missing from the cactus:v2.7.0 docker image #1262

Closed brantfaircloth closed 10 months ago

brantfaircloth commented 10 months ago

Good morning,

I hope you are all doing well. I'm working with a singularity container built from the cactus:v2.7.0 docker image and running halPhyloPTrain.py, which did not complete because the msa_view binary seems to be missing from the docker image (although msa_view is in the pre-compiled binaries tarball). It also seems, comparing the list of binaries included in the pre-compiled tarball to those in the docker image, that several other binaries are also (possibly) missing.

Thanks! -b

glennhickey commented 10 months ago

Good catch, thanks. Will be fixed in next release.