Closed glennhickey closed 3 months ago
I was trying to reproduce the lastz failure from #1466 by adding a sequence like
lastz
> ACACACACCAC
to the FASTA. lastz seems to support this okay by inventing its own sequence name for it, but it crashes downstream in consolidated.
consolidated
Anyway, this patches the fasta checker to through an error right away in this case. But I don't think helps at all with the original issue.
fasta
I was trying to reproduce the
lastzfailure from #1466 by adding a sequence liketo the FASTA.
lastzseems to support this okay by inventing its own sequence name for it, but it crashes downstream inconsolidated.Anyway, this patches the
fastachecker to through an error right away in this case. But I don't think helps at all with the original issue.